RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	CEP295	Q9C0D2	2601 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	WDR19	Q8NEZ3	1342 aa		10.72	□□□□□ -0.69
RPE-213	ENST00000445268	ZZEF1	O43149	2961 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	KRBA1	A5PL33	1030 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268		M0R2C6	588 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	GPAA1	O43292	621 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	PPFIA4	O75335	1185 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	APP	P05067	770 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	CFH	P08603	1231 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	HOXB8	P17481	243 aa	Predicted RBP	10.71	□□□□□ -0.69
RPE-213	ENST00000445268	KCNA4	P22459	653 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	CD52	P31358	61 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	ARHGAP4	P98171	946 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	UBE3A	Q05086	875 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	DMWD	Q09019	674 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	FBXO47	Q5MNV8	452 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	CELF3	Q5SZQ8	465 aa	Known RBP	10.71	□□□□□ -0.69
RPE-213	ENST00000445268	CES5A	Q6NT32	575 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	CCDC171	Q6TFL3	1326 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	THNSL1	Q8IYQ7	743 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	RASGRP4	Q8TDF6	673 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	NSUN6	Q8TEA1	469 aa	Known RBP	10.71	□□□□□ -0.69
RPE-213	ENST00000445268	ZFP91	Q96JP5	570 aa	Predicted RBP	10.71	□□□□□ -0.69
RPE-213	ENST00000445268	NECTIN4	Q96NY8	510 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	RMDN3	Q96TC7	470 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	TCF25	Q9BQ70	676 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	RTKN	Q9BST9	563 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	ADAM7	Q9H2U9	754 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	CPVL	Q9H3G5	476 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	AGO3	Q9H9G7	860 aa	Known RBP	10.71	□□□□□ -0.69
RPE-213	ENST00000445268	ENTPD7	Q9NQZ7	604 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	DBR1	Q9UK59	544 aa	Known RBP	10.71	□□□□□ -0.69
RPE-213	ENST00000445268	USP18	Q9UMW8	372 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	HCFC2	Q9Y5Z7	792 aa		10.71	□□□□□ -0.69
RPE-213	ENST00000445268	IGF2R	P11717	2491 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	DOCK8	Q8NF50	2099 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	TSPY2	A6NKD2	308 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	KIN	O60870	393 aa	Known RBP	10.7	□□□□□ -0.7
RPE-213	ENST00000445268	SDHB	P21912	280 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	RFX1	P22670	979 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	ADAM17	P78536	824 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	SP2	Q02086	613 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	LMNB2	Q03252	620 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	TPRN	Q4KMQ1	711 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	VARS2	Q5ST30	1063 aa	Known RBP	10.7	□□□□□ -0.7
RPE-213	ENST00000445268	CLASRP	Q8N2M8	674 aa	Known RBP	10.7	□□□□□ -0.7
RPE-213	ENST00000445268	COLGALT1	Q8NBJ5	622 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	CASP10	Q92851	521 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	TBC1D17	Q9HA65	648 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	AAAS	Q9NRG9	546 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	CA14	Q9ULX7	337 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	TELO2	Q9Y4R8	837 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	PCDHB12	Q9Y5F1	795 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	CDY2A	Q9Y6F7	541 aa		10.7	□□□□□ -0.7
RPE-213	ENST00000445268	RALGAPA1	Q6GYQ0	2036 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	EOMES	O95936	686 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	NR3C2	P08235	984 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	SCG2	P13521	617 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	ATP5J	P18859	108 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	MTHFR	P42898	656 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	ITIH3	Q06033	890 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	PPARA	Q07869	468 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	TDG	Q13569	410 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	ARHGEF16	Q5VV41	709 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	KIAA1841	Q6NSI8	718 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	ZSCAN25	Q6NSZ9	544 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	TSHZ1	Q6ZSZ6	1077 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	IFNL3	Q8IZI9	196 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	IL31RA	Q8NI17	732 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	IWS1	Q96ST2	819 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	PARD6A	Q9NPB6	346 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	CYP26B1	Q9NR63	512 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	PXMP2	Q9NR77	195 aa		10.69	□□□□□ -0.7
RPE-213	ENST00000445268	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
RPE-213	ENST00000445268	TBKBP1	A7MCY6	615 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	PRR5-ARHGAP8	B1AHC4	643 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	IPO8	O15397	1037 aa	Known RBP	10.68	□□□□□ -0.7
RPE-213	ENST00000445268	EIF3J	O75822	258 aa	Known RBP	10.68	□□□□□ -0.7
RPE-213	ENST00000445268	PDHB	P11177	359 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	MYCL	P12524	364 aa	Predicted RBP	10.68	□□□□□ -0.7
RPE-213	ENST00000445268	PBX3	P40426	434 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	ARHGAP8	P85298	464 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	CTDSPL2	Q05D32	466 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	TBC1D8B	Q0IIM8	1120 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	C1orf210	Q8IVY1	113 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.68	□□□□□ -0.7
RPE-213	ENST00000445268	PLCD3	Q8N3E9	789 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	APPBP2	Q92624	585 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	ZBTB10	Q96DT7	871 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	RNF216	Q9NWF9	866 aa	Predicted RBP	10.68	□□□□□ -0.7
RPE-213	ENST00000445268	DLGAP2	Q9P1A6	1054 aa		10.68	□□□□□ -0.7
RPE-213	ENST00000445268	SMG5	Q9UPR3	1016 aa	Known RBP	10.68	□□□□□ -0.7
RPE-213	ENST00000445268	FLNB	O75369	2602 aa	Known RBP	10.67	□□□□□ -0.7
RPE-213	ENST00000445268	LRRN2	O75325	713 aa		10.67	□□□□□ -0.7
RPE-213	ENST00000445268	ZIC2	O95409	532 aa	Predicted RBP	10.67	□□□□□ -0.7
RPE-213	ENST00000445268	STAG3L1	P0CL83	205 aa		10.67	□□□□□ -0.7
RPE-213	ENST00000445268	GNAT1	P11488	350 aa		10.67	□□□□□ -0.7
RPE-213	ENST00000445268	GLUL	P15104	373 aa		10.67	□□□□□ -0.7
RPE-213	ENST00000445268	TGM1	P22735	817 aa		10.67	□□□□□ -0.7
RPE-213	ENST00000445268	ZNF543	Q08ER8	600 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms