RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 TLR7Q9NYK1 1049 aaKnown RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 NDUFAB1O14561 156 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 CASQ2O14958 399 aaPredicted RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 HSPA8P11142 646 aaKnown RBP12.13□□□□□ -0.47
FN1-211ENST00000443816 PEX3P56589 373 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 LRRC63Q05C16 580 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 SLC39A14Q15043 492 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 CEP57Q86XR8 500 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 ZFYVE28Q9HCC9 887 aa12.13□□□□□ -0.47
FN1-211ENST00000443816 PRKAB2O43741 272 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 SASH1O94885 1247 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 KRT76Q01546 638 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 ATP6V1E2Q96A05 226 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 CARD6Q9BX69 1037 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 CLIC2O15247 247 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 CTNNA1P35221 906 aaKnown RBP12.12□□□□□ -0.47
FN1-211ENST00000443816 MXI1P50539 228 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 PRELPP51888 382 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
FN1-211ENST00000443816 MMEL1Q495T6 779 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 OR6B3Q8NGW1 331 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 SPATA33Q96N06 139 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 GPR101Q96P66 508 aaPredicted RBP12.12□□□□□ -0.47
FN1-211ENST00000443816 ACAD9Q9H845 621 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 ZNRF3Q9ULT6 936 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 MADDQ8WXG6 1647 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 VPS41P49754 854 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.12□□□□□ -0.47
FN1-211ENST00000443816 TRPV6Q9H1D0 765 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 IFNAR1P17181 557 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 GPIHBP1Q8IV16 184 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 RAVER2Q9HCJ3 691 aaKnown RBP12.12□□□□□ -0.47
FN1-211ENST00000443816 INPP5FQ9Y2H2 1132 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 ARHGEF40Q8TER5 1519 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 A0A1W2PQ27 194 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 A0A1W2PQ64 194 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 A0A1W2PQD8 194 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 CA4P22748 312 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 ZNF568Q3ZCX4 644 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 KLC3Q6P597 504 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 PSPC1Q8WXF1 523 aaKnown RBP12.12□□□□□ -0.47
FN1-211ENST00000443816 SDCCAG3Q96C92 435 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 GCOM2Q9BZD3 368 aaPredicted RBP12.12□□□□□ -0.47
FN1-211ENST00000443816 MCAMP43121 646 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 YAF2Q8IY57 180 aa12.12□□□□□ -0.47
FN1-211ENST00000443816 ACTN1P12814 892 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 PLCG1P19174 1290 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 VEPH1Q14D04 833 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 MGARPQ8TDB4 240 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 EPN1Q9Y6I3 576 aaPredicted RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 TNPO2O14787 897 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 CLCN1P35523 988 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 ZNF157P51786 506 aaPredicted RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 SPP2Q13103 211 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 CALR3Q96L12 384 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 JRKLQ9Y4A0 524 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 PPRC1Q5VV67 1664 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 BRD1O95696 1058 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 SLC4A1P02730 911 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 DHX38Q92620 1227 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 DDX50Q9BQ39 737 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 DARS2Q6PI48 645 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 PTPN22Q9Y2R2 807 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 SRPRBQ9Y5M8 271 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 H7C1W4 665 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 RWDD4Q6NW29 188 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 LRRC31Q6UY01 552 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 RWDD2AQ9UIY3 292 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 FRMPD1Q5SYB0 1578 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 GOLGA8SH3BPF8 625 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 GPSM2P81274 684 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 ZNF589Q86UQ0 364 aaPredicted RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 PARK7Q99497 189 aaKnown RBP12.11□□□□□ -0.47
FN1-211ENST00000443816 CALN1Q9BXU9 219 aa12.11□□□□□ -0.47
FN1-211ENST00000443816 HAUS4Q9H6D7 363 aa12.1□□□□□ -0.47
FN1-211ENST00000443816 SMYD2Q9NRG4 433 aa12.1□□□□□ -0.47
FN1-211ENST00000443816 CNOT7Q9UIV1 285 aaKnown RBP12.1□□□□□ -0.47
FN1-211ENST00000443816 CLGNO14967 610 aa12.1□□□□□ -0.47
FN1-211ENST00000443816 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
FN1-211ENST00000443816 FAM20AQ96MK3 541 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms