RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TSHZ1Q6ZSZ6 1077 aa16.64■□□□□ 0.25
HMGN1-208ENST00000443046 ADGRD2Q7Z7M1 963 aa16.64■□□□□ 0.25
HMGN1-208ENST00000443046 RTN4RL1Q86UN2 441 aaPredicted RBP16.64■□□□□ 0.25
HMGN1-208ENST00000443046 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
HMGN1-208ENST00000443046 PBXIP1Q96AQ6 731 aa16.64■□□□□ 0.25
HMGN1-208ENST00000443046 MRPL42Q9Y6G3 142 aaKnown RBP16.64■□□□□ 0.25
HMGN1-208ENST00000443046 DCHS1Q96JQ0 3298 aa16.64■□□□□ 0.25
HMGN1-208ENST00000443046 SPTBN4Q9H254 2564 aa16.64■□□□□ 0.25
HMGN1-208ENST00000443046 ST18O60284 1047 aa16.63■□□□□ 0.25
HMGN1-208ENST00000443046 PCNX4Q63HM2 1172 aa16.63■□□□□ 0.25
HMGN1-208ENST00000443046 XRRA1Q6P2D8 792 aa16.63■□□□□ 0.25
HMGN1-208ENST00000443046 PLEKHM2Q8IWE5 1019 aa16.63■□□□□ 0.25
HMGN1-208ENST00000443046 CMTR2Q8IYT2 770 aaKnown RBP16.63■□□□□ 0.25
HMGN1-208ENST00000443046 LNPKQ9C0E8 428 aa16.63■□□□□ 0.25
HMGN1-208ENST00000443046 AGO3Q9H9G7 860 aaKnown RBP16.63■□□□□ 0.25
HMGN1-208ENST00000443046 SQORQ9Y6N5 450 aa16.63■□□□□ 0.25
HMGN1-208ENST00000443046 GLP2RO95838 553 aa16.62■□□□□ 0.25
HMGN1-208ENST00000443046 TCF7P36402 384 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-208ENST00000443046 NDUFV1P49821 464 aa16.62■□□□□ 0.25
HMGN1-208ENST00000443046 TROAPQ12815 778 aa16.62■□□□□ 0.25
HMGN1-208ENST00000443046 RSPH3Q86UC2 560 aa16.62■□□□□ 0.25
HMGN1-208ENST00000443046 KLHL23Q8NBE8 558 aa16.62■□□□□ 0.25
HMGN1-208ENST00000443046 GIMAP8Q8ND71 665 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-208ENST00000443046 PPP2R3CQ969Q6 453 aa16.62■□□□□ 0.25
HMGN1-208ENST00000443046 CDY2AQ9Y6F7 541 aa16.62■□□□□ 0.25
HMGN1-208ENST00000443046 LOXHD1Q8IVV2 1947 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 GSTTP1A0A1W2PQM5 241 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 HIP1O00291 1037 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 PIK3CDO00329 1044 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 MEIS2O14770 477 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 ATP9AO75110 1047 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 PPFIA1Q13136 1202 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 GRIK4Q16099 956 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 SMC5Q8IY18 1101 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 FBXL6Q8N531 539 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 POF1BQ8WVV4 589 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 DNAJB3Q8WWF6 145 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 ASIC4Q96FT7 647 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 TUBE1Q9UJT0 475 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 PLXNA4Q9HCM2 1894 aa16.61■□□□□ 0.25
HMGN1-208ENST00000443046 CSPG5O95196 566 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 KCNA2P16389 499 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 CD52P31358 61 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 MRPS6P82932 125 aaKnown RBP16.6■□□□□ 0.25
HMGN1-208ENST00000443046 NPAS4Q8IUM7 802 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 SUSD6Q92537 303 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 PHF7Q9BWX1 381 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-208ENST00000443046 FTHL17Q9BXU8 183 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 IL25Q9H293 177 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 ERAP1Q9NZ08 941 aa16.6■□□□□ 0.25
HMGN1-208ENST00000443046 USP15Q9Y4E8 981 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-208ENST00000443046 RPLP2P05387 115 aaKnown RBP16.59■□□□□ 0.25
HMGN1-208ENST00000443046 ATF7P17544 494 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-208ENST00000443046 NRIP1P48552 1158 aa16.59■□□□□ 0.25
HMGN1-208ENST00000443046 SP4Q02446 784 aa16.59■□□□□ 0.25
HMGN1-208ENST00000443046 SIGLEC14Q08ET2 396 aa16.59■□□□□ 0.25
HMGN1-208ENST00000443046 USP17L6PQ6QN14 398 aa16.59■□□□□ 0.25
HMGN1-208ENST00000443046 NLRX1Q86UT6 975 aa16.59■□□□□ 0.25
HMGN1-208ENST00000443046 SUGP1Q8IWZ8 645 aaKnown RBP16.59■□□□□ 0.25
HMGN1-208ENST00000443046 SEPT1Q8WYJ6 367 aa16.59■□□□□ 0.25
HMGN1-208ENST00000443046 GPRASP2Q96D09 838 aa16.59■□□□□ 0.25
HMGN1-208ENST00000443046 BARX2Q9UMQ3 279 aaPredicted RBP16.59■□□□□ 0.25
HMGN1-208ENST00000443046 ITGB5P18084 799 aa16.58■□□□□ 0.24
HMGN1-208ENST00000443046 PCDHGC5Q9Y5F6 944 aa16.58■□□□□ 0.24
HMGN1-208ENST00000443046 PTPRZ1P23471 2315 aaPredicted RBP16.57■□□□□ 0.24
HMGN1-208ENST00000443046 IGSF9BQ9UPX0 1349 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 STAG3L1P0CL83 205 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 MARK3P27448 753 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 VCPP55072 806 aaKnown RBP16.57■□□□□ 0.24
HMGN1-208ENST00000443046 IER5Q5VY09 327 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 RBM23Q86U06 439 aaKnown RBP16.57■□□□□ 0.24
HMGN1-208ENST00000443046 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 VN1R2Q8NFZ6 395 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 ZBTB10Q96DT7 871 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 CDHR1Q96JP9 859 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 PCYT2Q99447 389 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 TMX1Q9H3N1 280 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 SMARCAD1Q9H4L7 1026 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 PADI3Q9ULW8 664 aa16.57■□□□□ 0.24
HMGN1-208ENST00000443046 RIF1Q5UIP0 2472 aaKnown RBP16.57■□□□□ 0.24
HMGN1-208ENST00000443046 FNDC1Q4ZHG4 1894 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-208ENST00000443046 KDM3AQ9Y4C1 1321 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 RRN3P2A6NIE6 340 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 IFIT3O14879 490 aaKnown RBP16.56■□□□□ 0.24
HMGN1-208ENST00000443046 SCG2P13521 617 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 INSRRP14616 1297 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 NUCB1Q02818 461 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 UBE3AQ05086 875 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 KCNC3Q14003 757 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 PAN2Q504Q3 1202 aaKnown RBP16.56■□□□□ 0.24
HMGN1-208ENST00000443046 FAM43BQ6ZT52 329 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-208ENST00000443046 GLG1Q92896 1179 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 SPZ1Q9BXG8 430 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 TLE6Q9H808 572 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 PCDHA2Q9Y5H9 948 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 TRPV2Q9Y5S1 764 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms