RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 DHX15O43143 795 aaKnown RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 PLA2G4BP0C869 781 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 TNNT3P45378 269 aaPredicted RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 ALDH5A1P51649 535 aaPredicted RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MYL5Q02045 173 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 NCBP1Q09161 790 aaKnown RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 ITGB3BPQ13352 177 aaPredicted RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 ZNF658Q5TYW1 1059 aaPredicted RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 RGMBQ6NW40 437 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 RASAL3Q86YV0 1011 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 FAM133AQ8N9E0 248 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 NEK9Q8TD19 979 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 SGSM3Q96HU1 749 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MMP19Q99542 508 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MPHOSPH6Q99547 160 aaKnown RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 RGL1Q9NZL6 768 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MANSC4A6NHS7 340 aaPredicted RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MYMKA6NI61 221 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 EIF3JO75822 258 aaKnown RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 FCER1AP12319 257 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MUTP22033 750 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 ERCC5P28715 1186 aaPredicted RBP8.99□□□□□ -0.97
CCDC39-201ENST00000442201 CASQ1P31415 396 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MIER3Q7Z3K6 550 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 ANKRD13CQ8N6S4 541 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MNS1Q8NEH6 495 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 DYDC2Q96IM9 177 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 PTPN18Q99952 460 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 EXOC1Q9NV70 894 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 PASKQ96RG2 1323 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 PVALEFA0A1B0GWK0 134 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 SOWAHBA6NEL2 793 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 KLRC4O43908 158 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 ATP9AO75110 1047 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 SLITRK3O94933 977 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 RHOBTB3O94955 611 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 TPH2Q8IWU9 490 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 SMC1BQ8NDV3 1235 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 PORCNQ9H237 461 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 R3HDMLQ9H3Y0 253 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 MORF4L1Q9UBU8 362 aa8.99□□□□□ -0.97
CCDC39-201ENST00000442201 KRT76Q01546 638 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 PDE4DQ08499 809 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 CTTNQ14247 550 aaKnown RBP8.98□□□□□ -0.97
CCDC39-201ENST00000442201 CNNM4Q6P4Q7 775 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 DYMQ7RTS9 669 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 SMYD4Q8IYR2 804 aaPredicted RBP8.98□□□□□ -0.97
CCDC39-201ENST00000442201 DDX12PQ92771 950 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 SAMM50Q9Y512 469 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 ASTN1O14525 1302 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 RBBP6Q7Z6E9 1792 aaKnown RBP8.98□□□□□ -0.97
CCDC39-201ENST00000442201 RGS20O76081 388 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 ADCY5O95622 1261 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 IDEP14735 1019 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 EDNRBP24530 442 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 NCAPHQ15003 741 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 KLHL10Q6JEL2 608 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 UNC13DQ70J99 1090 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 GPBP1Q86WP2 473 aa8.98□□□□□ -0.97
CCDC39-201ENST00000442201 ENOX1Q8TC92 643 aaKnown RBP8.98□□□□□ -0.97
CCDC39-201ENST00000442201 DNAJC25-GNG10A0A024R161 153 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 WDR64B1ANS9 1081 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 SPATA31C2B4DYI2 1134 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 KIF3CO14782 793 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 EYA4O95677 639 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 KRT18P05783 430 aaKnown RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 PGK2P07205 417 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 P4HBP07237 508 aaKnown RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 SFNP31947 248 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 JAK3P52333 1124 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 PSMC6P62333 389 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 STIM1Q13586 685 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 ZKSCAN8Q15776 578 aaPredicted RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 C11orf91Q3C1V1 193 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 SYT2Q8N9I0 419 aaPredicted RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 NACC1Q96RE7 527 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 IVNS1ABPQ9Y6Y0 642 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 RIOK3O14730 519 aaKnown RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 CD44P16070 742 aaKnown RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 CYP11B2P19099 503 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 SLC12A3P55017 1021 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 INHBEP58166 350 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 FAM110CQ1W6H9 321 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 SWT1Q5T5J6 900 aaKnown RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 GIMAP8Q8ND71 665 aaPredicted RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 RDM1Q8NG50 284 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 LXNQ9BS40 222 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 TRIM5Q9C035 493 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 BHMT2Q9H2M3 363 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 ZSWIM4Q9H7M6 989 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 ZCCHC17Q9NP64 241 aaKnown RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 ZNF446Q9NWS9 450 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 GDAQ9Y2T3 454 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 TLL2Q9Y6L7 1015 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 AP5Z1O43299 807 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 STRNO43815 780 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 SLC10A3P09131 477 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 KCNA2P16389 499 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms