RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 MEIS2O14770 477 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 GYPCP04921 128 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 CAPN2P17655 700 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 MUTP22033 750 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 CCT6AP40227 531 aaKnown RBP10.15□□□□□ -0.78
HDAC6-209ENST00000440653 ETF1P62495 437 aaKnown RBP10.15□□□□□ -0.78
HDAC6-209ENST00000440653 MAP3K9P80192 1104 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 MAP3K10Q02779 954 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 SHHQ15465 462 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 HSP90AA4PQ58FG1 418 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 FIGNQ5HY92 759 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 FKBP15Q5T1M5 1219 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 PPP4R3CPQ6ZMV5 832 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 TMTC1Q8IUR5 882 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 CCDC65Q8IXS2 484 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 SAMD3Q8N6K7 520 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 ETNPPLQ8TBG4 499 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 ATXN2LQ8WWM7 1075 aaKnown RBP10.15□□□□□ -0.78
HDAC6-209ENST00000440653 LPAR1Q92633 364 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 HAS1Q92839 578 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 HOOK2Q96ED9 719 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 PNMA5Q96PV4 448 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 RANBP17Q9H2T7 1088 aaKnown RBP10.15□□□□□ -0.78
HDAC6-209ENST00000440653 L2HGDHQ9H9P8 463 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 ZCCHC17Q9NP64 241 aaKnown RBP10.15□□□□□ -0.78
HDAC6-209ENST00000440653 PRR12Q9ULL5 1215 aa10.15□□□□□ -0.78
HDAC6-209ENST00000440653 MRPL11Q9Y3B7 192 aaKnown RBP10.15□□□□□ -0.78
HDAC6-209ENST00000440653 PHIPQ8WWQ0 1821 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 A0A1W2PQJ5 194 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 TCP10L2B9ZVM9 353 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 IRF6O14896 467 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 WDR46O15213 610 aaKnown RBP10.14□□□□□ -0.79
HDAC6-209ENST00000440653 FCGRTP55899 365 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 EHHADHQ08426 723 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 GRIN2CQ14957 1233 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 LRRC26Q2I0M4 334 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 C9orf50Q5SZB4 431 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 CENPPQ6IPU0 288 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 CYP26C1Q6V0L0 522 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 CNOT6LQ96LI5 555 aaKnown RBP10.14□□□□□ -0.79
HDAC6-209ENST00000440653 ABHD10Q9NUJ1 306 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 TRMT1Q9NXH9 659 aaKnown RBP10.14□□□□□ -0.79
HDAC6-209ENST00000440653 TAB2Q9NYJ8 693 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 MYO1AQ9UBC5 1043 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 DNAI1Q9UI46 699 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 FEM1BQ9UK73 627 aa10.14□□□□□ -0.79
HDAC6-209ENST00000440653 UBE4BO95155 1302 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 TRIM49BA6NDI0 452 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 MYMKA6NI61 221 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L15C9J2P7 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L13C9JLJ4 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L11C9JVI0 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L18D6R9N7 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L22D6RA61 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L17D6RBQ6 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L19D6RCP7 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L20D6RJB6 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 EDIL3O43854 480 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 SLU7O95391 586 aaKnown RBP10.13□□□□□ -0.79
HDAC6-209ENST00000440653 GNA14O95837 355 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 FDX1P10109 184 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 CAP2P40123 477 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 UBXN1Q04323 297 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L24Q0WX57 530 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 COASYQ13057 564 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 MCM6Q14566 821 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 TSR1Q2NL82 804 aaKnown RBP10.13□□□□□ -0.79
HDAC6-209ENST00000440653 FAM26FQ5R3K3 315 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 USP17L6PQ6QN14 398 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 KIAA0895Q8NCT3 520 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.13□□□□□ -0.79
HDAC6-209ENST00000440653 NEK9Q8TD19 979 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 PXYLP1Q8TE99 480 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 LRRC15Q8TF66 581 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 CEP63Q96MT8 703 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 ERGIC2Q96RQ1 377 aa10.13□□□□□ -0.79
HDAC6-209ENST00000440653 NUP88Q99567 741 aaPredicted RBP10.13□□□□□ -0.79
HDAC6-209ENST00000440653 ZNHIT6Q9NWK9 470 aaKnown RBP10.13□□□□□ -0.79
HDAC6-209ENST00000440653 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 A0A1W2PRG0 241 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 FRMD3A2A2Y4 597 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 GCOM1H8Y6P7 765 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-209ENST00000440653 PDHXO00330 501 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 TEX33O43247 280 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 POLR2MP0CAP2 368 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 BCRP11274 1271 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 RPA1P27694 616 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 CASP14P31944 242 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 MTIF2P46199 727 aaKnown RBP10.12□□□□□ -0.79
HDAC6-209ENST00000440653 ADKP55263 362 aaKnown RBP10.12□□□□□ -0.79
HDAC6-209ENST00000440653 GHRHRQ02643 423 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 RBL2Q08999 1139 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 SPIRE1Q08AE8 756 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 STK4Q13043 487 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 TRIM32Q13049 653 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 SNAPC2Q13487 334 aa10.12□□□□□ -0.79
HDAC6-209ENST00000440653 TUBB2AQ13885 445 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms