RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 KRT40Q6A162 431 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 TAF2Q6P1X5 1199 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 MYOCDQ8IZQ8 938 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 MICALL1Q8N3F8 863 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 CRYGNQ8WXF5 182 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 GLG1Q92896 1179 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 ZMYND12Q9H0C1 365 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 AGO4Q9HCK5 861 aaKnown RBP19.19■□□□□ 0.66
COL16A1-204ENST00000440437 TUBE1Q9UJT0 475 aa19.19■□□□□ 0.66
COL16A1-204ENST00000440437 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.18■□□□□ 0.66
COL16A1-204ENST00000440437 ADAMTS3O15072 1205 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 PRPF3O43395 683 aaKnown RBP19.18■□□□□ 0.66
COL16A1-204ENST00000440437 EPB41L2O43491 1005 aaKnown RBP19.18■□□□□ 0.66
COL16A1-204ENST00000440437 GTPBP6O43824 516 aaPredicted RBP19.18■□□□□ 0.66
COL16A1-204ENST00000440437 CHRNA1P02708 482 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 ACTR2P61160 394 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 ERVK-21P61565 698 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 NTRK3Q16288 839 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 FAM117BQ6P1L5 589 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 NIPA1Q7RTP0 329 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 APBB2Q92870 758 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 ASB2Q96Q27 587 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 SDF4Q9BRK5 362 aa19.18■□□□□ 0.66
COL16A1-204ENST00000440437 MYH9P35579 1960 aaKnown RBP19.17■□□□□ 0.66
COL16A1-204ENST00000440437 XIRP2A4UGR9 3374 aa19.17■□□□□ 0.66
COL16A1-204ENST00000440437 ATG7O95352 703 aa19.17■□□□□ 0.66
COL16A1-204ENST00000440437 PSMA5P28066 241 aa19.17■□□□□ 0.66
COL16A1-204ENST00000440437 EVCP57679 992 aa19.17■□□□□ 0.66
COL16A1-204ENST00000440437 JAKMIP3Q5VZ66 844 aa19.17■□□□□ 0.66
COL16A1-204ENST00000440437 SP7Q8TDD2 431 aaPredicted RBP19.17■□□□□ 0.66
COL16A1-204ENST00000440437 GDPD5Q8WTR4 605 aa19.17■□□□□ 0.66
COL16A1-204ENST00000440437 TGS1Q96RS0 853 aaKnown RBP19.17■□□□□ 0.66
COL16A1-204ENST00000440437 IFIH1Q9BYX4 1025 aaKnown RBP19.17■□□□□ 0.66
COL16A1-204ENST00000440437 INSL6Q9Y581 213 aa19.17■□□□□ 0.66
COL16A1-204ENST00000440437 ATG2AQ2TAZ0 1938 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 IGLV3-22A0A075B6J6 115 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 FAM86B1E9PN63 330 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 CYP3A4P08684 503 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 FAM86B2P0C5J1 330 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 INSRRP14616 1297 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 MRPS5P82675 430 aaKnown RBP19.16■□□□□ 0.66
COL16A1-204ENST00000440437 PLPPR4Q7Z2D5 763 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 CCDC12Q8WUD4 166 aaPredicted RBP19.16■□□□□ 0.66
COL16A1-204ENST00000440437 PHKBQ93100 1093 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 TOP1MTQ969P6 601 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 RNF26Q9BY78 433 aaPredicted RBP19.16■□□□□ 0.66
COL16A1-204ENST00000440437 AZI2Q9H6S1 392 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 SUGCTQ9HAC7 445 aa19.16■□□□□ 0.66
COL16A1-204ENST00000440437 MUC3AQ02505 3323 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 IGKV6D-21A0A0A0MT36 114 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 RRN3P2A6NIE6 340 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 CCNE2O96020 404 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 GHRP10912 638 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 TOB2Q14106 344 aaPredicted RBP19.15■□□□□ 0.66
COL16A1-204ENST00000440437 PLCB4Q15147 1175 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 RSPH3Q86UC2 560 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 PLA2G4DQ86XP0 818 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 DNAJB3Q8WWF6 145 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 ZBTB10Q96DT7 871 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 TSPYL2Q9H2G4 693 aaPredicted RBP19.15■□□□□ 0.66
COL16A1-204ENST00000440437 C6orf50Q9HD87 102 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 MTUS1Q9ULD2 1270 aa19.15■□□□□ 0.66
COL16A1-204ENST00000440437 TCF20Q9UGU0 1960 aaKnown RBP19.15■□□□□ 0.66
COL16A1-204ENST00000440437 TTC3P53804 2025 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 EVPLQ92817 2033 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 DHX15O43143 795 aaKnown RBP19.14■□□□□ 0.65
COL16A1-204ENST00000440437 IFNAR1P17181 557 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 PDIA3P30101 505 aaKnown RBP19.14■□□□□ 0.65
COL16A1-204ENST00000440437 ZNF76P36508 570 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 STAT5BP51692 787 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 IGBP1P78318 339 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 LPIN1Q14693 890 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 FBXO47Q5MNV8 452 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 MCTP2Q6DN12 878 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 RUFY3Q7L099 469 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 REXO1Q8N1G1 1221 aaKnown RBP19.14■□□□□ 0.65
COL16A1-204ENST00000440437 C17orf80Q9BSJ5 609 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 ZSWIM6Q9HCJ5 1215 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 LMCD1Q9NZU5 365 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 TRPC6Q9Y210 931 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 CDY2AQ9Y6F7 541 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 TTC28Q96AY4 2481 aa19.14■□□□□ 0.65
COL16A1-204ENST00000440437 DDX39AO00148 427 aaKnown RBP19.13■□□□□ 0.65
COL16A1-204ENST00000440437 PPFIA3O75145 1194 aa19.13■□□□□ 0.65
COL16A1-204ENST00000440437 RPLP2P05387 115 aaKnown RBP19.13■□□□□ 0.65
COL16A1-204ENST00000440437 MRPS6P82932 125 aaKnown RBP19.13■□□□□ 0.65
COL16A1-204ENST00000440437 ABHD15Q6UXT9 468 aa19.13■□□□□ 0.65
COL16A1-204ENST00000440437 TRAPPC12Q8WVT3 735 aa19.13■□□□□ 0.65
COL16A1-204ENST00000440437 NCOA5Q9HCD5 579 aaKnown RBP19.13■□□□□ 0.65
COL16A1-204ENST00000440437 KIAA1671Q9BY89 1806 aa19.13■□□□□ 0.65
COL16A1-204ENST00000440437 GNA11P29992 359 aa19.12■□□□□ 0.65
COL16A1-204ENST00000440437 SLC26A2P50443 739 aa19.12■□□□□ 0.65
COL16A1-204ENST00000440437 SETQ01105 290 aaPredicted RBP19.12■□□□□ 0.65
COL16A1-204ENST00000440437 TFF2Q03403 129 aa19.12■□□□□ 0.65
COL16A1-204ENST00000440437 SKIV2LQ15477 1246 aaKnown RBP19.12■□□□□ 0.65
COL16A1-204ENST00000440437 TSHZ1Q6ZSZ6 1077 aa19.12■□□□□ 0.65
COL16A1-204ENST00000440437 CCDC60Q8IWA6 550 aaPredicted RBP19.12■□□□□ 0.65
COL16A1-204ENST00000440437 CCDC148Q8NFR7 591 aa19.12■□□□□ 0.65
COL16A1-204ENST00000440437 RASGRP4Q8TDF6 673 aa19.12■□□□□ 0.65
COL16A1-204ENST00000440437 TNPO1Q92973 898 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms