RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 POLD4Q9HCU8 107 aa12.77□□□□□ -0.36
SMPD4P2-201ENST00000440167 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.36
SMPD4P2-201ENST00000440167 BMP2KQ9NSY1 1161 aaPredicted RBP12.77□□□□□ -0.36
SMPD4P2-201ENST00000440167 PANK4Q9NVE7 773 aa12.77□□□□□ -0.36
SMPD4P2-201ENST00000440167 ABT1Q9ULW3 272 aaKnown RBP12.77□□□□□ -0.36
SMPD4P2-201ENST00000440167 TLL2Q9Y6L7 1015 aa12.77□□□□□ -0.36
SMPD4P2-201ENST00000440167 NFASCO94856 1347 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 ZSWIM8A7E2V4 1837 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 ZNF236Q9UL36 1845 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 TRIM49BA6NDI0 452 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 MANSC4A6NHS7 340 aaPredicted RBP12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 WDR64B1ANS9 1081 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 P4HBP07237 508 aaKnown RBP12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 MSNP26038 577 aaKnown RBP12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 JAK3P52333 1124 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 GIT2Q14161 759 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 CT47A1Q5JQC4 288 aaPredicted RBP12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 SMC1BQ8NDV3 1235 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 GLIS3Q8NEA6 775 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 CDHR1Q96JP9 859 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 NACC1Q96RE7 527 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 REEP2Q9BRK0 252 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 ZHX3Q9H4I2 956 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 TBC1D7Q9P0N9 293 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
SMPD4P2-201ENST00000440167 RSPH10B2B2RC85 870 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 RSPH10BP0C881 870 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 MUTP22033 750 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 ADORA2AP29274 412 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 ICAM3P32942 547 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 FANCCQ00597 558 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 EHHADHQ08426 723 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 GRM1Q13255 1194 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 STIM1Q13586 685 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 LRRC41Q15345 812 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 ZNF746Q6NUN9 644 aaPredicted RBP12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 CYFIP1Q7L576 1253 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 TRMT1LQ7Z2T5 733 aaKnown RBP12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 SPC24Q8NBT2 197 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 FGFBP2Q9BYJ0 223 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 SLC9A2Q9UBY0 812 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 RWDD2AQ9UIY3 292 aa12.76□□□□□ -0.37
SMPD4P2-201ENST00000440167 ADGRA2Q96PE1 1338 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 TMEM150BA6NC51 233 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 FAM155AB1AL88 458 aaPredicted RBP12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 B4DLN1 442 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 UBA1P22314 1058 aaKnown RBP12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 SFNP31947 248 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 QARSP47897 775 aaKnown RBP12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 PMS1P54277 932 aaKnown RBP12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 TPD52L1Q16890 204 aaPredicted RBP12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 FAM110CQ1W6H9 321 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 SPATA1Q5VX52 437 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 GPR142Q7Z601 462 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 FBXO16Q8IX29 292 aaPredicted RBP12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 CCDC65Q8IXS2 484 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 KCTD17Q8N5Z5 321 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 MPHOSPH6Q99547 160 aaKnown RBP12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 SENP7Q9BQF6 1050 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 SH2D3AQ9BRG2 576 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 IFNKQ9P0W0 207 aa12.75□□□□□ -0.37
SMPD4P2-201ENST00000440167 PTMAP06454 111 aaKnown RBP12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 ZNF18P17022 549 aa12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 ACTR2P61160 394 aa12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 HERC4Q5GLZ8 1057 aaPredicted RBP12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 FAM26FQ5R3K3 315 aa12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 ZIC5Q96T25 663 aa12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 XPO4Q9C0E2 1151 aaKnown RBP12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 GABBR1Q9UBS5 961 aa12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 PCDHA10Q9Y5I2 948 aa12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
SMPD4P2-201ENST00000440167 FRMD3A2A2Y4 597 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 PSMA7O14818 248 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 ARIH2O95376 493 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 SERPINC1P01008 464 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 CDK11BP21127 795 aaKnown RBP12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 PSMC5P62195 406 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 PSMD2Q13200 908 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 ZNF792Q3KQV3 632 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 PLA2G4FQ68DD2 849 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 SWSAP1Q6NVH7 229 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 C1orf186Q6ZWK4 172 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 SFR1Q86XK3 245 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 IFNL1Q8IU54 200 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 CCDC60Q8IWA6 550 aaPredicted RBP12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 DRC7Q8IY82 874 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 SMAP1Q8IYB5 467 aaPredicted RBP12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 P2RX5Q93086 422 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 DHTKD1Q96HY7 919 aaPredicted RBP12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 PCDHA2Q9Y5H9 948 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 TMEM88BA6NKF7 163 aa12.73□□□□□ -0.37
SMPD4P2-201ENST00000440167 SFI1A8K8P3 1242 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms