RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MS4A14Q96JA4 679 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 CNOT6LQ96LI5 555 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 ERGIC2Q96RQ1 377 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 NOC4LQ9BVI4 516 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 TLR10Q9BXR5 811 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 PPP2R3BQ9Y5P8 575 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 LOC285556D6RIA3 1793 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 GOLGA6L7A0A1B0GV03 622 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 ZSCAN5CA6NGD5 496 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 FAM155AB1AL88 458 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 GNAT2P19087 354 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 HNRNPH3P31942 346 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 EIF4A3P38919 411 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 DYNLL1P63167 89 aaKnown RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 CFAP221Q4G0U5 840 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 FAM83AQ86UY5 434 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 PARP9Q8IXQ6 854 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 CCDC155Q8N6L0 562 aa9.42□□□□□ -0.9
HPS4-206ENST00000439453 GIMAP8Q8ND71 665 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 DHTKD1Q96HY7 919 aaPredicted RBP9.42□□□□□ -0.9
HPS4-206ENST00000439453 RHOBTB3O94955 611 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 LCA5LO95447 670 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 IBSPP21815 317 aaPredicted RBP9.41□□□□□ -0.9
HPS4-206ENST00000439453 MIIPQ5JXC2 388 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 PPANQ9NQ55 473 aaKnown RBP9.41□□□□□ -0.9
HPS4-206ENST00000439453 DISC1Q9NRI5 854 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 PLAGL2Q9UPG8 496 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 HTTP42858 3142 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 PDHBP11177 359 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 NAALADL2Q58DX5 795 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 ARL6IP4Q66PJ3 421 aaKnown RBP9.41□□□□□ -0.9
HPS4-206ENST00000439453 CATIPQ7Z7H3 387 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 CEP57Q86XR8 500 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 FAM114A1Q8IWE2 563 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
HPS4-206ENST00000439453 LRP2BPQ9P2M1 347 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 SALL4Q9UJQ4 1053 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 CCDC189A1A4V9 331 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 AKR1B10O60218 316 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 GCFC2P16383 781 aaKnown RBP9.41□□□□□ -0.9
HPS4-206ENST00000439453 MAGEA1P43355 309 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 CYB5D1Q6P9G0 228 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 MAATS1Q7Z4T9 603 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 CCDC50Q8IVM0 306 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 ANKRD13CQ8N6S4 541 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 ENAHQ8N8S7 591 aaPredicted RBP9.41□□□□□ -0.9
HPS4-206ENST00000439453 CASKIN2Q8WXE0 1202 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 ESR2Q92731 530 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 P2RX5Q93086 422 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 USP40Q9NVE5 1235 aa9.41□□□□□ -0.9
HPS4-206ENST00000439453 DDX20Q9UHI6 824 aaKnown RBP9.41□□□□□ -0.9
HPS4-206ENST00000439453 NPM3O75607 178 aaKnown RBP9.4□□□□□ -0.9
HPS4-206ENST00000439453 CCNE1P24864 410 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 HPDP32754 393 aaPredicted RBP9.4□□□□□ -0.9
HPS4-206ENST00000439453 MRPL12P52815 198 aaKnown RBP9.4□□□□□ -0.9
HPS4-206ENST00000439453 NLRP5P59047 1200 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 EVX2Q03828 476 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 KLHDC7AQ5VTJ3 777 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 ANKRD40Q6AI12 368 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 ZSCAN29Q8IWY8 852 aaPredicted RBP9.4□□□□□ -0.9
HPS4-206ENST00000439453 FUKQ8N0W3 1084 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 C4orf32Q8N8J7 132 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 RASSF8Q8NHQ8 419 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 WHAMMQ8TF30 809 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 IQCDQ96DY2 449 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 TMBIM4Q9HC24 238 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 RNF14Q9UBS8 474 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 PLAAQ9Y263 795 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 PARP14Q460N5 1801 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 DDTLA6NHG4 134 aaPredicted RBP9.4□□□□□ -0.9
HPS4-206ENST00000439453 MINDY4BA8MYZ0 360 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 PJA2O43164 708 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 USP2O75604 605 aaPredicted RBP9.4□□□□□ -0.9
HPS4-206ENST00000439453 MAP3K10Q02779 954 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 FAM228AQ86W67 206 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 ARFGAP2Q8N6H7 521 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 NOX5Q96PH1 765 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 ZSCAN10Q96SZ4 725 aaPredicted RBP9.4□□□□□ -0.9
HPS4-206ENST00000439453 TSKSQ9UJT2 592 aa9.4□□□□□ -0.9
HPS4-206ENST00000439453 BICDL2A1A5D9 508 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 GMNCA6NCL1 334 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 SSBP05455 408 aaKnown RBP eCLIP9.4□□□□□ -0.91
HPS4-206ENST00000439453 LDLRAD1Q5T700 205 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 IFIT1BQ5T764 474 aaKnown RBP9.4□□□□□ -0.91
HPS4-206ENST00000439453 C3orf20Q8ND61 904 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 MAGEC3Q8TD91 643 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 FAM151AQ8WW52 585 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 MTMR8Q96EF0 704 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 HHIPL1Q96JK4 782 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 OSBPL7Q9BZF2 842 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 GBA2Q9HCG7 927 aaPredicted RBP9.4□□□□□ -0.91
HPS4-206ENST00000439453 HAUS2Q9NVX0 235 aa9.4□□□□□ -0.91
HPS4-206ENST00000439453 BAZ2BQ9UIF8 2168 aaKnown RBP9.4□□□□□ -0.91
HPS4-206ENST00000439453 GOLGA6L10A6NI86 522 aa9.39□□□□□ -0.91
HPS4-206ENST00000439453 DNM1LO00429 736 aa9.39□□□□□ -0.91
HPS4-206ENST00000439453 ADAMTS3O15072 1205 aa9.39□□□□□ -0.91
HPS4-206ENST00000439453 BUB1O43683 1085 aa9.39□□□□□ -0.91
HPS4-206ENST00000439453 MYL1P05976 194 aa9.39□□□□□ -0.91
HPS4-206ENST00000439453 HSPA9P38646 679 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms