RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 BMP3P12645 472 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 ALAS1P13196 640 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 PTGIRP43119 386 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 RARSP54136 660 aaKnown RBP9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 CENPCQ03188 943 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 GPM6BQ13491 265 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 TEAD4Q15561 434 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 EPC2Q52LR7 807 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 TMEM63BQ5T3F8 832 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 FAM117BQ6P1L5 589 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 CTR9Q6PD62 1173 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 LRRC8DQ7L1W4 858 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 TMC7Q7Z402 723 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 FAM160B2Q86V87 743 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 ERC1Q8IUD2 1116 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 TRMT2AQ8IZ69 625 aaKnown RBP9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 FBXL6Q8N531 539 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 ITPKCQ96DU7 683 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 CITED4Q96RK1 184 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 C17orf80Q9BSJ5 609 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 BCL11AQ9H165 835 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 CYP39A1Q9NYL5 469 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
R3HDM1-208ENST00000438014 MYO5AQ9Y4I1 1855 aaKnown RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 TMEM232C9JQI7 657 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 STXBP3O00186 592 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 EML1O00423 815 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 GOLIM4O00461 696 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 ZIC2O95409 532 aaPredicted RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 AMHP03971 560 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 NOS2P35228 1153 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 STAT2P52630 851 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 IKQ13123 557 aaPredicted RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 GPNMBQ14956 572 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 SLFN13Q68D06 897 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 NSMFQ6X4W1 530 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 ZNF444Q8N0Y2 327 aaPredicted RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 LRRC47Q8N1G4 583 aaKnown RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 GMCL1P1Q8NEA9 526 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 STAG1Q8WVM7 1258 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 MPHOSPH6Q99547 160 aaKnown RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 ZNF287Q9HBT7 754 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 IGSF5Q9NSI5 407 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 PKD2L1Q9P0L9 805 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 ARPP21Q9UBL0 812 aaPredicted RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 LRFN2Q9ULH4 789 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 ISY1Q9ULR0 285 aaKnown RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 SLC4A4Q9Y6R1 1079 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 ZDBF2Q9HCK1 2354 aa9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 PTPRZ1P23471 2315 aaPredicted RBP9.81□□□□□ -0.84
R3HDM1-208ENST00000438014 MBTPS2O43462 519 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 NBNO60934 754 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 TTLL1O95922 423 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 BRD2P25440 801 aaKnown RBP9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 ADD2P35612 726 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 CHMP4BP1P59074 171 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 HTRA4P83105 476 aaPredicted RBP9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 ZXDAP98168 799 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 TAGLNQ01995 201 aaKnown RBP9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 RBL2Q08999 1139 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 SMAD4Q13485 552 aaKnown RBP9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 PPP2R5BQ15173 497 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 RPAINQ86UA6 219 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 SESTD1Q86VW0 696 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 DNAJC2Q99543 621 aaKnown RBP9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 FAM86C1Q9NVL1 165 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 DDX49Q9Y6V7 483 aaKnown RBP9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 MCM3APO60318 1980 aa9.8□□□□□ -0.84
R3HDM1-208ENST00000438014 NAV1Q8NEY1 1877 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 SCN5AQ14524 2016 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 IGKV6D-41A0A0C4DH26 115 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 B4DLN1 442 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 PROB1E7EW31 1015 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 FZD6O60353 706 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 PLA2G6O60733 806 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 CKBP12277 381 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 TRIM27P14373 513 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 LTBRP36941 435 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 MRPL12P52815 198 aaKnown RBP9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 WDR4P57081 412 aaKnown RBP9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 CTC1Q2NKJ3 1217 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 SBK1Q52WX2 424 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 HSP90AB4PQ58FF6 505 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 SH3PXD2AQ5TCZ1 1133 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 TMEM192Q8IY95 271 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 ALDH16A1Q8IZ83 802 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 ZDHHC1Q8WTX9 485 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 SCFD2Q8WU76 684 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 PPP1R13LQ8WUF5 828 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 KLF16Q9BXK1 252 aaPredicted RBP9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 MTMR4Q9NYA4 1195 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 ZBED9Q6R2W3 1325 aa9.79□□□□□ -0.84
R3HDM1-208ENST00000438014 COL4A4P53420 1690 aaPredicted RBP9.78□□□□□ -0.84
R3HDM1-208ENST00000438014 CACNA1GO43497 2377 aa9.78□□□□□ -0.84
R3HDM1-208ENST00000438014 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
R3HDM1-208ENST00000438014 RB1P06400 928 aa9.78□□□□□ -0.84
R3HDM1-208ENST00000438014 P4HBP07237 508 aaKnown RBP9.78□□□□□ -0.84
R3HDM1-208ENST00000438014 VAMP1P23763 118 aa9.78□□□□□ -0.84
R3HDM1-208ENST00000438014 AVPR2P30518 371 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms