RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 TNMDQ9H2S6 317 aa15.02■□□□□ -0
RPE-208ENST00000436630 TRIM17Q9Y577 477 aa15.02■□□□□ -0
RPE-208ENST00000436630 A0A087X0B3 334 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 MED24O75448 989 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 SPATA31C1P0DKV0 1188 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 HSPA1AP0DMV8 641 aaKnown RBP15.01□□□□□ -0.01
RPE-208ENST00000436630 HSPA1BP0DMV9 641 aaKnown RBP15.01□□□□□ -0.01
RPE-208ENST00000436630 SLC26A2P50443 739 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 AMPD3Q01432 767 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 CYP4A11Q02928 519 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 ZRSR1Q15695 479 aaKnown RBP15.01□□□□□ -0.01
RPE-208ENST00000436630 PDXDC2PQ6P474 469 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 ABHD15Q6UXT9 468 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 C4orf19Q8IY42 314 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 OR6J1Q8NGC5 347 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 AFAP1L1Q8TED9 768 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 LARP4BQ92615 738 aaKnown RBP15.01□□□□□ -0.01
RPE-208ENST00000436630 RAD54LQ92698 747 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 DYDC2Q96IM9 177 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 PNMA5Q96PV4 448 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 NACC1Q96RE7 527 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 GPR20Q99678 358 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 TSKSQ9UJT2 592 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 KIAA1024Q9UPX6 916 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 DNM3Q9UQ16 869 aa15.01□□□□□ -0.01
RPE-208ENST00000436630 IGKV6D-21A0A0A0MT36 114 aa15□□□□□ -0.01
RPE-208ENST00000436630 POTEFA5A3E0 1075 aa15□□□□□ -0.01
RPE-208ENST00000436630 BACH1O14867 736 aa15□□□□□ -0.01
RPE-208ENST00000436630 SEPT4O43236 478 aa15□□□□□ -0.01
RPE-208ENST00000436630 MSCO60682 206 aa15□□□□□ -0.01
RPE-208ENST00000436630 DUSP11O75319 330 aaKnown RBP15□□□□□ -0.01
RPE-208ENST00000436630 SLITRK3O94933 977 aa15□□□□□ -0.01
RPE-208ENST00000436630 XRCC6P12956 609 aaKnown RBP eCLIP15□□□□□ -0.01
RPE-208ENST00000436630 HOXD8P13378 290 aaPredicted RBP15□□□□□ -0.01
RPE-208ENST00000436630 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
RPE-208ENST00000436630 SMPD1P17405 629 aa15□□□□□ -0.01
RPE-208ENST00000436630 LONRF3Q496Y0 759 aa15□□□□□ -0.01
RPE-208ENST00000436630 NAALADL2Q58DX5 795 aa15□□□□□ -0.01
RPE-208ENST00000436630 MAP3K21Q5TCX8 1036 aa15□□□□□ -0.01
RPE-208ENST00000436630 POTEGQ6S5H5 508 aa15□□□□□ -0.01
RPE-208ENST00000436630 TLK2Q86UE8 772 aa15□□□□□ -0.01
RPE-208ENST00000436630 TPH2Q8IWU9 490 aa15□□□□□ -0.01
RPE-208ENST00000436630 FAM167AQ96KS9 214 aa15□□□□□ -0.01
RPE-208ENST00000436630 AZI2Q9H6S1 392 aa15□□□□□ -0.01
RPE-208ENST00000436630 KBTBD4Q9NVX7 518 aa15□□□□□ -0.01
RPE-208ENST00000436630 SERTAD1Q9UHV2 236 aa15□□□□□ -0.01
RPE-208ENST00000436630 GNEQ9Y223 722 aaKnown RBP15□□□□□ -0.01
RPE-208ENST00000436630 FRMPD3Q5JV73 1810 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 LGR5O75473 907 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 EYA4O95677 639 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 HSPA8P11142 646 aaKnown RBP14.99□□□□□ -0.01
RPE-208ENST00000436630 ELNP15502 786 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 GRK4P32298 578 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 TCF7P36402 384 aaPredicted RBP14.99□□□□□ -0.01
RPE-208ENST00000436630 CTCFP49711 727 aaPredicted RBP14.99□□□□□ -0.01
RPE-208ENST00000436630 CPT1AP50416 773 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 SP4Q02446 784 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 CTTNQ14247 550 aaKnown RBP14.99□□□□□ -0.01
RPE-208ENST00000436630 RBM43Q6ZSC3 357 aaKnown RBP14.99□□□□□ -0.01
RPE-208ENST00000436630 SV2BQ7L1I2 683 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 BANK1Q8NDB2 785 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 CCDC43Q96MW1 224 aaKnown RBP14.99□□□□□ -0.01
RPE-208ENST00000436630 AP5M1Q9H0R1 490 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 SPC25Q9HBM1 224 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 ZNF302Q9NR11 478 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 RGL1Q9NZL6 768 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 KCND2Q9NZV8 630 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 TMEM63CQ9P1W3 806 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 GABBR1Q9UBS5 961 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 DBR1Q9UK59 544 aaKnown RBP14.99□□□□□ -0.01
RPE-208ENST00000436630 PPME1Q9Y570 386 aa14.99□□□□□ -0.01
RPE-208ENST00000436630 MAFBQ9Y5Q3 323 aaPredicted RBP14.99□□□□□ -0.01
RPE-208ENST00000436630 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.98□□□□□ -0.01
RPE-208ENST00000436630 GSTTP1A0A1W2PQM5 241 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 PPFIA4O75335 1185 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 SMC2O95347 1197 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 RARBP10826 455 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 NKX3-2P78367 333 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 CACNB2Q08289 660 aaPredicted RBP14.98□□□□□ -0.01
RPE-208ENST00000436630 POSTNQ15063 836 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 DGKDQ16760 1214 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 HSDL1Q3SXM5 330 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 PRAMEF19Q5SWL8 479 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 OTUD6AQ7L8S5 288 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 PLPPR4Q7Z2D5 763 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 SH3RF1Q7Z6J0 888 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 CCDC60Q8IWA6 550 aaPredicted RBP14.98□□□□□ -0.01
RPE-208ENST00000436630 COPS5Q92905 334 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 PANK2Q9BZ23 570 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 SMARCAD1Q9H4L7 1026 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 ANKEF1Q9NU02 776 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 BLOC1S4Q9NUP1 217 aa14.98□□□□□ -0.01
RPE-208ENST00000436630 ZNF215Q9UL58 517 aaPredicted RBP14.98□□□□□ -0.01
RPE-208ENST00000436630 A6NJR5 290 aa14.97□□□□□ -0.01
RPE-208ENST00000436630 GTPBP6O43824 516 aaPredicted RBP14.97□□□□□ -0.01
RPE-208ENST00000436630 KPNA6O60684 536 aa14.97□□□□□ -0.01
RPE-208ENST00000436630 INHAP05111 366 aa14.97□□□□□ -0.01
RPE-208ENST00000436630 MMP3P08254 477 aa14.97□□□□□ -0.01
RPE-208ENST00000436630 PLA2G4BP0C869 781 aa14.97□□□□□ -0.01
RPE-208ENST00000436630 YWHABP31946 246 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms