RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 SSU72P8A0A1W2PR75 194 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 ANO9A1A5B4 782 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 EIF4A3P38919 411 aaKnown RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 EPS15P42566 896 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 TNFAIP1Q13829 316 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 TNIP1Q15025 636 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 PAPD7Q5XG87 772 aaKnown RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 PARD6BQ9BYG5 372 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 GLIS2Q9BZE0 524 aaPredicted RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 LACRTQ9GZZ8 138 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 TAOK3Q9H2K8 898 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 TYW1Q9NV66 732 aaKnown RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 FBXO28Q9NVF7 368 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 WDR46O15213 610 aaKnown RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 AKR1B10O60218 316 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 SLITRK3O94933 977 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 PLEKP08567 350 aaPredicted RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 ZSCAN20P17040 1043 aaPredicted RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 ERCC3P19447 782 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 HSD17B4P51659 736 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 CYP27A1Q02318 531 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 RINT1Q6NUQ1 792 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 LPAR1Q92633 364 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 SECISBP2LQ93073 1101 aaKnown RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 DYDC2Q96IM9 177 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 ZNF577Q9BSK1 485 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 LSM14BQ9BX40 385 aaKnown RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 ZNF341Q9BYN7 854 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 IFIH1Q9BYX4 1025 aaKnown RBP18.43■□□□□ 0.54
LIMK1-203ENST00000435201 ZSWIM4Q9H7M6 989 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 CCPG1Q9ULG6 757 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 PCDHA13Q9Y5I0 950 aa18.43■□□□□ 0.54
LIMK1-203ENST00000435201 RCCD1A6NED2 376 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 ZNF263O14978 683 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 RPL13P26373 211 aaKnown RBP18.42■□□□□ 0.54
LIMK1-203ENST00000435201 CTTNQ14247 550 aaKnown RBP18.42■□□□□ 0.54
LIMK1-203ENST00000435201 BRD3Q15059 726 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
LIMK1-203ENST00000435201 DEFB132Q7Z7B7 95 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 TPH2Q8IWU9 490 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 CCDC155Q8N6L0 562 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 TEKT3Q9BXF9 490 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 EPC1Q9H2F5 836 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 KCND2Q9NZV8 630 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 TFR2Q9UP52 801 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 SAR1BQ9Y6B6 198 aa18.42■□□□□ 0.54
LIMK1-203ENST00000435201 PHF20L1A8MW92 1017 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 EIF3DO15371 548 aaKnown RBP eCLIP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 SLC16A3O15427 465 aaKnown RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 CHMP2AO43633 222 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 NOL4O94818 638 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 FAM13AO94988 1023 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 MYBP10242 640 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 RPS12P25398 132 aaKnown RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 ZNF280AP59817 542 aaPredicted RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 RASA3Q14644 834 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 EPHA7Q15375 998 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 SLC9C1Q4G0N8 1177 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 SFMBT2Q5VUG0 894 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 CC2D1AQ6P1N0 951 aaPredicted RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 PRPF38AQ8NAV1 312 aaKnown RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 MSANTD4Q8NCY6 345 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 NEK9Q8TD19 979 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 NACC1Q96RE7 527 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 ARMCX3Q9UH62 379 aaPredicted RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 FHOD1Q9Y613 1164 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 FRMPD4Q14CM0 1322 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 CCDC151A5D8V7 595 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 RSPH10B2B2RC85 870 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 PRPF6O94906 941 aaKnown RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 GCNT3O95395 438 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 TUBBP07437 444 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 RSPH10BP0C881 870 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 PNMA6AP0CW24 399 aaPredicted RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 HOXD13P35453 343 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 UBXN2AP68543 259 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 GHRHRQ02643 423 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 SAMD1Q6SPF0 538 aaPredicted RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 C1orf186Q6ZWK4 172 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 MCF2L2Q86YR7 1114 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 TRIM58Q8NG06 486 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 RIT2Q99578 217 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 MXRA8Q9BRK3 442 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 METTL14Q9HCE5 456 aaKnown RBP18.41■□□□□ 0.54
LIMK1-203ENST00000435201 SEL1LQ9UBV2 794 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 UBE4BO95155 1302 aa18.41■□□□□ 0.54
LIMK1-203ENST00000435201 BRCA1P38398 1863 aaKnown RBP18.4■□□□□ 0.54
LIMK1-203ENST00000435201 ATP1A1P05023 1023 aaKnown RBP18.4■□□□□ 0.54
LIMK1-203ENST00000435201 SERPING1P05155 500 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 BCRP11274 1271 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 INPP5BP32019 993 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 CKAP4Q07065 602 aaKnown RBP18.4■□□□□ 0.54
LIMK1-203ENST00000435201 KCNH2Q12809 1159 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 ASTE1Q2TB18 679 aaPredicted RBP18.4■□□□□ 0.54
LIMK1-203ENST00000435201 B3GNT9Q6UX72 402 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 PIGOQ8TEQ8 1089 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 RPGRIP1Q96KN7 1286 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 KIAA1683Q9H0B3 1180 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 ARFGAP3Q9NP61 516 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms