RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 MFSD14AQ96MC6 490 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 PLVAPQ9BX97 442 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 ERAP1Q9NZ08 941 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 PKD2L1Q9P0L9 805 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 TAF6LQ9Y6J9 622 aa13.34□□□□□ -0.27
CHRNA1-207ENST00000435083 E7EWF7 191 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 KCNA2P16389 499 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 CD52P31358 61 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 MRPS6P82932 125 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 HERC4Q5GLZ8 1057 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 CTCFLQ8NI51 663 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 PPP2R3CQ969Q6 453 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 CDHR1Q96JP9 859 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 MYL10Q9BUA6 226 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 FAM49AQ9H0Q0 323 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 SMARCAD1Q9H4L7 1026 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 SEC63Q9UGP8 760 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 PLAGL2Q9UPG8 496 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 MRPL42Q9Y6G3 142 aaKnown RBP13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 TTC3P53804 2025 aa13.33□□□□□ -0.28
CHRNA1-207ENST00000435083 MBLAC1A4D2B0 266 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 PIK3CDO00329 1044 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 CAMK1Q14012 370 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 PAN2Q504Q3 1202 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 MARCH8Q5T0T0 291 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 RTN4RL1Q86UN2 441 aaPredicted RBP13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 IGDCC4Q8TDY8 1250 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 RUFY2Q8WXA3 655 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 LINC01599Q8WXQ3 324 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 P2RX5Q93086 422 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 ZBTB10Q96DT7 871 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 AGO3Q9H9G7 860 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 ITGB1P05556 798 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 ITGB5P18084 799 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 DNAJB1P25685 340 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 KIF5BP33176 963 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 ANTXR2P58335 489 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 IER5Q5VY09 327 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 ADGRD2Q7Z7M1 963 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 NPAS4Q8IUM7 802 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 CMTR2Q8IYT2 770 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 SPPL3Q8TCT6 385 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 EDAQ92838 391 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 PSTPIP2Q9H939 334 aa13.32□□□□□ -0.28
CHRNA1-207ENST00000435083 RRN3P2A6NIE6 340 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 M0QZ92 97 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 STAG3L1P0CL83 205 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 INSRRP14616 1297 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 IBSPP21815 317 aaPredicted RBP13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 TMEM62Q0P6H9 643 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 MTMR1Q13613 665 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 NAALADL2Q58DX5 795 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 TTC22Q5TAA0 569 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 RBM23Q86U06 439 aaKnown RBP13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 KLHL23Q8NBE8 558 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 EXOC6Q8TAG9 804 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 MSLNLQ96KJ4 702 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 FTHL17Q9BXU8 183 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 TRPV2Q9Y5S1 764 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 UBIAD1Q9Y5Z9 338 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 KIAA1671Q9BY89 1806 aa13.31□□□□□ -0.28
CHRNA1-207ENST00000435083 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 DDAH1O94760 285 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 PLEKHA8P1O95397 391 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 GSPT1P15170 499 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 NRIP1P48552 1158 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 UBE2SQ16763 222 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 MB21D2Q8IYB1 491 aaPredicted RBP13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 CMTR1Q8N1G2 835 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 EFHBQ8N7U6 833 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 POF1BQ8WVV4 589 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 LZTS2Q9BRK4 669 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 AZI2Q9H6S1 392 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 CLEC1BQ9P126 229 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 LRFN2Q9ULH4 789 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 PADI3Q9ULW8 664 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 SQORQ9Y6N5 450 aa13.3□□□□□ -0.28
CHRNA1-207ENST00000435083 PIEZO1Q92508 2521 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 SPDYE3A6NKU9 549 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 EYA4O95677 639 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 SCG2P13521 617 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 CHMLP26374 656 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 GNAQP50148 359 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 GATMP50440 423 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 PAK2Q13177 524 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 CASC1Q6TDU7 716 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 NFXL1Q6ZNB6 911 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 SRBD1Q8N5C6 995 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 MICAL1Q8TDZ2 1067 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 TRAPPC12Q8WVT3 735 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 TNPO1Q92973 898 aaKnown RBP13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 PBXIP1Q96AQ6 731 aa13.29□□□□□ -0.28
CHRNA1-207ENST00000435083 PCYT2Q99447 389 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms