RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SOS2Q07890 1332 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 PXDNQ92626 1479 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 ASAP2O43150 1006 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 KLC1Q07866 573 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 KLHL30Q0D2K2 578 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 SEPT6Q14141 434 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 SFMBT2Q5VUG0 894 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 SDR42E1Q8WUS8 393 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 RNF26Q9BY78 433 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 RAB17Q9H0T7 212 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 SIK3Q9Y2K2 1263 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 BICDL2A1A5D9 508 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 PCCAP05165 728 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 GCLCP48506 637 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 CDK17Q00537 523 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 PDXDC1Q6P996 788 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 PHC3Q8NDX5 983 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 ANKS1AQ92625 1134 aa8.11□□□□□ -1.11
CPSF6-202ENST00000435070 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.114e-7■■□□□ 14.1
CPSF6-202ENST00000435070 DHTKD1Q96HY7 919 aaPredicted RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 RBM41Q96IZ5 413 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 LUC7LQ9NQ29 371 aaKnown RBP8.11□□□□□ -1.11
CPSF6-202ENST00000435070 PGRMC1O00264 195 aaKnown RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 PDE6CP51160 858 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 NAB2Q15742 525 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 LRRC15Q8TF66 581 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 LSM14BQ9BX40 385 aaKnown RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SEMA6BQ9H3T3 888 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 OCEL1Q9H607 264 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 TLR2O60603 784 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 FGFR4P22455 802 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 GBP1P32455 592 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 PLBD2Q8NHP8 589 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 FAM81AQ8TBF8 368 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SPIRE2Q8WWL2 714 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 BAP1Q92560 729 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 RMDN2Q96LZ7 410 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 DDX50Q9BQ39 737 aaKnown RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 ZMYND12Q9H0C1 365 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 ADAM7Q9H2U9 754 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 ARPP21Q9UBL0 812 aaPredicted RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SETSIPP0DME0 302 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 PLCG1P19174 1290 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SEPT7Q16181 437 aaKnown RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 CCDC6Q16204 474 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 PEX26Q7Z412 305 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 DZIP3Q86Y13 1208 aaKnown RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 CCNJLQ8IV13 435 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SUPT20HQ8NEM7 779 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 PBKQ96KB5 322 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 FGD4Q96M96 766 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 CNNM2Q9H8M5 875 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 N4BP2Q86UW6 1770 aaPredicted RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 PJA2O43164 708 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SP100P23497 879 aaPredicted RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 TTC8Q8TAM2 541 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SEMA4AQ9H3S1 761 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 USH1CQ9Y6N9 552 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 LRRC37A3O60309 1634 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SPATA31A3Q5VYP0 1347 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 ENTPD5O75356 428 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 RHOBTB3O94955 611 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 ALADP13716 330 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 ALDH3A1P30838 453 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 SERPINB4P48594 390 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 IFIT5Q13325 482 aaKnown RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 ZNF211Q13398 564 aaPredicted RBP8.1□□□□□ -1.11
CPSF6-202ENST00000435070 HGSNATQ68CP4 663 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 TLCD1Q96CP7 247 aa8.1□□□□□ -1.11
CPSF6-202ENST00000435070 A0A1W2PQJ5 194 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 ZNF76P36508 570 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 MRPS35P82673 323 aaKnown RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 TTLL12Q14166 644 aaPredicted RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 RCN2Q14257 317 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 FAM83BQ5T0W9 1011 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 IFIT1BQ5T764 474 aaKnown RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 RASIP1Q5U651 963 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 CATIPQ7Z7H3 387 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 CCDC84Q86UT8 332 aaPredicted RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 LCORLQ8N3X6 602 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 NEK9Q8TD19 979 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 RNF25Q96BH1 459 aaPredicted RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 DNAJC17Q9NVM6 304 aaKnown RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 MRC1P22897 1456 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 GSG1L2A8MUP6 293 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 FGGP02679 453 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 KRT13P13646 458 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 TARSP26639 723 aaKnown RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 INF2Q27J81 1249 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 SEPT14Q6ZU15 432 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 KIAA0825Q8IV33 1275 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 GLIS3Q8NEA6 775 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 FBXO25Q8TCJ0 367 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 WDR35Q9P2L0 1181 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 NWD2Q9ULI1 1742 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 TTC36A6NLP5 189 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 CCDC169A6NNP5 214 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 PPFIA2O75334 1257 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 SEPT2Q15019 361 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 MTHFD1LQ6UB35 978 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms