RNA–Protein interactions for RNA: ENST00000434795.5

CPNE1-213, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-213ENST00000434795 CCDC85BQ15834 202 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-213ENST00000434795 GRIK4Q16099 956 aa20.38■□□□□ 0.85
CPNE1-213ENST00000434795 MCTP2Q6DN12 878 aa20.38■□□□□ 0.85
CPNE1-213ENST00000434795 PLPPR4Q7Z2D5 763 aa20.38■□□□□ 0.85
CPNE1-213ENST00000434795 SDF4Q9BRK5 362 aa20.38■□□□□ 0.85
CPNE1-213ENST00000434795 RNF26Q9BY78 433 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-213ENST00000434795 NCOA5Q9HCD5 579 aaKnown RBP20.38■□□□□ 0.85
CPNE1-213ENST00000434795 CYP46A1Q9Y6A2 500 aa20.38■□□□□ 0.85
CPNE1-213ENST00000434795 TANC1Q9C0D5 1861 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 IGLV3-22A0A075B6J6 115 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 CTSHP09668 335 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 INSRRP14616 1297 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 GNA11P29992 359 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 STAT5BP51692 787 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 AKAP17AQ02040 695 aaKnown RBP20.37■□□□□ 0.85
CPNE1-213ENST00000434795 ERICH6BQ5W0A0 696 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 TAF2Q6P1X5 1199 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 SPRED2Q7Z698 418 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 CCDC12Q8WUD4 166 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-213ENST00000434795 SEPT8Q92599 483 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 ZNF274Q96GC6 653 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-213ENST00000434795 GBF1Q92538 1859 aa20.37■□□□□ 0.85
CPNE1-213ENST00000434795 IGKV6D-21A0A0A0MT36 114 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 RRN3P2A6NIE6 340 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 EDIL3O43854 480 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 CCNE2O96020 404 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 ABHD15Q6UXT9 468 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 PLA2G4DQ86XP0 818 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 ARNTL2Q8WYA1 636 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 LARP6Q9BRS8 491 aaKnown RBP20.36■□□□□ 0.85
CPNE1-213ENST00000434795 SLC26A6Q9BXS9 759 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 AZI2Q9H6S1 392 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 MTCH2Q9Y6C9 303 aa20.36■□□□□ 0.85
CPNE1-213ENST00000434795 MGAT3Q09327 533 aa20.35■□□□□ 0.85
CPNE1-213ENST00000434795 PLCB4Q15147 1175 aa20.35■□□□□ 0.85
CPNE1-213ENST00000434795 FAM117BQ6P1L5 589 aa20.35■□□□□ 0.85
CPNE1-213ENST00000434795 REXO1Q8N1G1 1221 aaKnown RBP20.35■□□□□ 0.85
CPNE1-213ENST00000434795 DNAJB3Q8WWF6 145 aa20.35■□□□□ 0.85
CPNE1-213ENST00000434795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-213ENST00000434795 AMHP03971 560 aa20.34■□□□□ 0.85
CPNE1-213ENST00000434795 CIITAP33076 1130 aa20.34■□□□□ 0.85
CPNE1-213ENST00000434795 TNPO1Q92973 898 aaKnown RBP20.34■□□□□ 0.85
CPNE1-213ENST00000434795 TOP1MTQ969P6 601 aa20.34■□□□□ 0.85
CPNE1-213ENST00000434795 ZBTB10Q96DT7 871 aa20.34■□□□□ 0.85
CPNE1-213ENST00000434795 UPF3BQ9BZI7 483 aaKnown RBP20.34■□□□□ 0.85
CPNE1-213ENST00000434795 SH3GLB2Q9NR46 395 aa20.34■□□□□ 0.85
CPNE1-213ENST00000434795 TUBE1Q9UJT0 475 aa20.34■□□□□ 0.85
CPNE1-213ENST00000434795 INSL6Q9Y581 213 aa20.34■□□□□ 0.85
CPNE1-213ENST00000434795 IPO5O00410 1097 aaKnown RBP20.33■□□□□ 0.85
CPNE1-213ENST00000434795 LPXNO60711 386 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 ERVK-21P61565 698 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 IGBP1P78318 339 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 HTRA4P83105 476 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-213ENST00000434795 RSPH3Q86UC2 560 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 BICD2Q8TD16 824 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 RASGRP4Q8TDF6 673 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 UIMC1Q96RL1 719 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 PDRG1Q9NUG6 133 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 VPS54Q9P1Q0 977 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 PCDHA2Q9Y5H9 948 aa20.33■□□□□ 0.85
CPNE1-213ENST00000434795 POTEB3A0JP26 581 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 LINC01553A4QN01 128 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 SLC26A2P50443 739 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 SSRP1Q08945 709 aaKnown RBP20.32■□□□□ 0.84
CPNE1-213ENST00000434795 GRB10Q13322 594 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 LPIN1Q14693 890 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 KRT40Q6A162 431 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 POTEBQ6S5H4 581 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 MYOCDQ8IZQ8 938 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 ATXN2LQ8WWM7 1075 aaKnown RBP20.32■□□□□ 0.84
CPNE1-213ENST00000434795 APBB2Q92870 758 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 IFIH1Q9BYX4 1025 aaKnown RBP20.32■□□□□ 0.84
CPNE1-213ENST00000434795 TBC1D22BQ9NU19 505 aa20.32■□□□□ 0.84
CPNE1-213ENST00000434795 REV3LO60673 3130 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 DDX39AO00148 427 aaKnown RBP20.31■□□□□ 0.84
CPNE1-213ENST00000434795 ENPP3O14638 875 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 ATP4AP20648 1035 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 USP11P51784 963 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 SWSAP1Q6NVH7 229 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 CCDC148Q8NFR7 591 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 TRAPPC12Q8WVT3 735 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 TGS1Q96RS0 853 aaKnown RBP20.31■□□□□ 0.84
CPNE1-213ENST00000434795 ZNF577Q9BSK1 485 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 SUGCTQ9HAC7 445 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 TRPC6Q9Y210 931 aa20.31■□□□□ 0.84
CPNE1-213ENST00000434795 SPTBN5Q9NRC6 3674 aaKnown RBP20.31■□□□□ 0.84
CPNE1-213ENST00000434795 PTPRSQ13332 1948 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 GTPBP6O43824 516 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-213ENST00000434795 GHRP10912 638 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 NLRP5P59047 1200 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 PRR16Q569H4 304 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 FBXO47Q5MNV8 452 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 MTHFD1LQ6UB35 978 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 TRIM22Q8IYM9 498 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 NME8Q8N427 588 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 SP7Q8TDD2 431 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-213ENST00000434795 LENG9Q96B70 501 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 CDY2AQ9Y6F7 541 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 TTC28Q96AY4 2481 aa20.3■□□□□ 0.84
CPNE1-213ENST00000434795 PRRC2BQ5JSZ5 2229 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms