RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SLC13A1Q9BZW2 595 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 ZDHHC5Q9C0B5 715 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 PALD1Q9ULE6 856 aa7.83□□□□□ -1.16
USP54-206ENST00000433394 KIAA1324LA8MWY0 1029 aaPredicted RBP7.82□□□□□ -1.16
USP54-206ENST00000433394 FOXP2O15409 715 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 TGM5O43548 720 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 KDM1AO60341 852 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 TADA3O75528 432 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 SPINK2P20155 84 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 AFMP43652 599 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 CD97P48960 835 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 ERVK-21P61565 698 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 EPHA7Q15375 998 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 CREB3L3Q68CJ9 461 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 NLRX1Q86UT6 975 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 ABHD4Q8TB40 342 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 SH3RF2Q8TEC5 729 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 CDH19Q9H159 772 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 C19orf44Q9H6X5 657 aa7.82□□□□□ -1.16
USP54-206ENST00000433394 PAK6Q9NQU5 681 aaPredicted RBP7.82□□□□□ -1.16
USP54-206ENST00000433394 TNKSO95271 1327 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 F8W031 263 aaPredicted RBP7.81□□□□□ -1.16
USP54-206ENST00000433394 MAFGO15525 162 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 XPOTO43592 962 aaKnown RBP7.81□□□□□ -1.16
USP54-206ENST00000433394 YBX3P16989 372 aaKnown RBP eCLIP7.81□□□□□ -1.16
USP54-206ENST00000433394 ZSCAN20P17040 1043 aaPredicted RBP7.81□□□□□ -1.16
USP54-206ENST00000433394 SDHAP31040 664 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 IARSP41252 1262 aaKnown RBP7.81□□□□□ -1.16
USP54-206ENST00000433394 HERVK_113P62684 666 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 HLTFQ14527 1009 aaKnown RBP eCLIP7.81□□□□□ -1.16
USP54-206ENST00000433394 ESPNLQ6ZVH7 1005 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 SIRT2Q8IXJ6 389 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 HIPK4Q8NE63 616 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 TSR2Q969E8 191 aaKnown RBP7.81□□□□□ -1.16
USP54-206ENST00000433394 IP6K2Q9UHH9 426 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 ANKRD6Q9Y2G4 727 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 GIT1Q9Y2X7 761 aa7.81□□□□□ -1.16
USP54-206ENST00000433394 ST20-MTHFSA0A0A6YYL1 179 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 KLHL33A6NCF5 533 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 PLIN1O60240 522 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 DBHP09172 617 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 KRT85P78386 507 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 ACAP2Q15057 778 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 PHYKPLQ8IUZ5 450 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 RAVER1Q8IY67 606 aaKnown RBP7.8□□□□□ -1.16
USP54-206ENST00000433394 CCDC146Q8IYE0 955 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 TTLL11Q8NHH1 800 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 WDR48Q8TAF3 677 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 JPH3Q8WXH2 748 aaPredicted RBP7.8□□□□□ -1.16
USP54-206ENST00000433394 FERMT2Q96AC1 680 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 FAXDC2Q96IV6 333 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 RC3H2Q9HBD1 1191 aaKnown RBP7.8□□□□□ -1.16
USP54-206ENST00000433394 TNFRSF12AQ9NP84 129 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
USP54-206ENST00000433394 ARHGAP28Q9P2N2 729 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 MSRAQ9UJ68 235 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 INVSQ9Y283 1065 aa7.8□□□□□ -1.16
USP54-206ENST00000433394 ARID4BQ4LE39 1312 aaPredicted RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 UBA6A0AVT1 1052 aaPredicted RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 ABLIM1O14639 778 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 CAND2O75155 1236 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 RFPL1O75677 317 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 KRT18P05783 430 aaKnown RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 PTX3P26022 381 aaPredicted RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 TBX4P57082 545 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 RAB3GAP1Q15042 981 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 GFOD2Q3B7J2 385 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 EFCAB2Q5VUJ9 269 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 CCSAPQ6IQ19 270 aaPredicted RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 CXorf57Q6NSI4 855 aaKnown RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 C1orf162Q8NEQ5 155 aaPredicted RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 SSH1Q8WYL5 1049 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 ERCC4Q92889 916 aaPredicted RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 SLC6A17Q9H1V8 727 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 ZMAT4Q9H898 229 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 VTA1Q9NP79 307 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 TOPORSQ9NS56 1045 aaPredicted RBP7.79□□□□□ -1.16
USP54-206ENST00000433394 FBLN5Q9UBX5 448 aa7.79□□□□□ -1.16
USP54-206ENST00000433394 TCRBV5S2A0A599 114 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 ZC3H12DA2A288 527 aaKnown RBP7.78□□□□□ -1.16
USP54-206ENST00000433394 NUDT19A8MXV4 375 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 DVL2O14641 736 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 SGSM2O43147 1006 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 RBP3P10745 1247 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 MTHFD2P13995 350 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 TRHRP34981 398 aaPredicted RBP7.78□□□□□ -1.16
USP54-206ENST00000433394 ERVFC1P60507 584 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 GRIN1Q05586 938 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 KIR3DS1Q14943 382 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 PAN2Q504Q3 1202 aaKnown RBP7.78□□□□□ -1.16
USP54-206ENST00000433394 TTC38Q5R3I4 469 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 ADGRF1Q5T601 910 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 FAM102BQ5T8I3 360 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 NXNQ6DKJ4 435 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 GBP4Q96PP9 640 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 TUBGCP5Q96RT8 1024 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 PNMA8BQ9ULN7 279 aaPredicted RBP7.78□□□□□ -1.16
USP54-206ENST00000433394 CTNND2Q9UQB3 1225 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 ASB1Q9Y576 335 aa7.78□□□□□ -1.16
USP54-206ENST00000433394 CCDC194A0A1B0GVG4 234 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms