RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 ADAMTS3O15072 1205 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 PALMO75781 387 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 GFPT2O94808 682 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 MYZAPP0CAP1 466 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 HNRNPH1P31943 449 aaKnown RBP16.18■□□□□ 0.18
DDX56-205ENST00000433257 EPS15P42566 896 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 ADCY7P51828 1080 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
DDX56-205ENST00000433257 RPS6KA1Q15418 735 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 AOC3Q16853 763 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 ZCWPW2Q504Y3 356 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 ASPRV1Q53RT3 343 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 HYIQ5T013 277 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 SLF2Q8IX21 1173 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 SLITRK6Q9H5Y7 841 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 TMBIM4Q9HC24 238 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 TMEM59LQ9UK28 342 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 NFU1Q9UMS0 254 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 DAAM1Q9Y4D1 1078 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.18■□□□□ 0.18
DDX56-205ENST00000433257 SNED1Q8TER0 1413 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 USP17L8P0C7I0 530 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 MNAT1P51948 309 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 KLHL30Q0D2K2 578 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 PDCLQ13371 301 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 FAM26FQ5R3K3 315 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 NAA35Q5VZE5 725 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 ZC3H3Q8IXZ2 948 aaKnown RBP16.18■□□□□ 0.18
DDX56-205ENST00000433257 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 SNX29Q8TEQ0 813 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 LRRC15Q8TF66 581 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 ZNF473Q8WTR7 871 aaKnown RBP16.18■□□□□ 0.18
DDX56-205ENST00000433257 PNMA5Q96PV4 448 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 MXD3Q9BW11 206 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 RIOX1Q9H6W3 641 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 SWAP70Q9UH65 585 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 STX8Q9UNK0 236 aa16.18■□□□□ 0.18
DDX56-205ENST00000433257 A0A0A6YYK5 440 aaPredicted RBP16.17■□□□□ 0.18
DDX56-205ENST00000433257 ZNF233A6NK53 670 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 TMCO5BA8MYB1 307 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 GLI1P08151 1106 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 PRDX5P30044 214 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 TXKP42681 527 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 NOVP48745 357 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 CARSP49589 748 aaKnown RBP16.17■□□□□ 0.18
DDX56-205ENST00000433257 PRELPP51888 382 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 NPEPPSP55786 919 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 EIF3BP55884 814 aaKnown RBP16.17■□□□□ 0.18
DDX56-205ENST00000433257 C16orf86Q6ZW13 317 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 NLRP14Q86W24 1093 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 NIM1KQ8IY84 436 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 DDX12PQ92771 950 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 LSM14BQ9BX40 385 aaKnown RBP16.17■□□□□ 0.18
DDX56-205ENST00000433257 CNOT10Q9H9A5 744 aaKnown RBP16.17■□□□□ 0.18
DDX56-205ENST00000433257 FBXL5Q9UKA1 691 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 CAPN7Q9Y6W3 813 aa16.17■□□□□ 0.18
DDX56-205ENST00000433257 TRAF5O00463 557 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 EPHB6O15197 1021 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 RASA1P20936 1047 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 CXCR5P32302 372 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 RDXP35241 583 aaKnown RBP16.16■□□□□ 0.18
DDX56-205ENST00000433257 USP11P51784 963 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 IFFO1Q0D2I5 559 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 KCNMA1Q12791 1236 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 ITGB3BPQ13352 177 aaPredicted RBP16.16■□□□□ 0.18
DDX56-205ENST00000433257 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 MAATS1Q7Z4T9 603 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 TRIM59Q8IWR1 403 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 KCTD17Q8N5Z5 321 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 IFT81Q8WYA0 676 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 RNPC3Q96LT9 517 aaKnown RBP16.16■□□□□ 0.18
DDX56-205ENST00000433257 KRT12Q99456 494 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 VCPKMTQ9H867 229 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 FAM114A2Q9NRY5 505 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 LRRC37AA6NMS7 1700 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 PITPNM2Q9BZ72 1349 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 BAZ2BQ9UIF8 2168 aaKnown RBP16.16■□□□□ 0.18
DDX56-205ENST00000433257 PLIN4Q96Q06 1357 aa16.16■□□□□ 0.18
DDX56-205ENST00000433257 CHUKO15111 745 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 NCK2O43639 380 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 BUB1O43683 1085 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 FLOT1O75955 427 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 SMTNP53814 917 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 GSCP56915 257 aaPredicted RBP16.15■□□□□ 0.18
DDX56-205ENST00000433257 COASYQ13057 564 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 DPY19L2Q6NUT2 758 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
DDX56-205ENST00000433257 MYCBPAPQ8TBZ2 947 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 CASKIN2Q8WXE0 1202 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 GPR101Q96P66 508 aaPredicted RBP16.15■□□□□ 0.18
DDX56-205ENST00000433257 PANK4Q9NVE7 773 aa16.15■□□□□ 0.18
DDX56-205ENST00000433257 WTIPA6NIX2 430 aaPredicted RBP16.14■□□□□ 0.18
DDX56-205ENST00000433257 BHMG1C9JSJ3 638 aaPredicted RBP16.14■□□□□ 0.18
DDX56-205ENST00000433257 PGRMC1O00264 195 aaKnown RBP16.14■□□□□ 0.18
DDX56-205ENST00000433257 CETN3O15182 167 aa16.14■□□□□ 0.18
DDX56-205ENST00000433257 KIF4AO95239 1232 aa16.14■□□□□ 0.18
DDX56-205ENST00000433257 PAEPP09466 180 aa16.14■□□□□ 0.18
DDX56-205ENST00000433257 YY1P25490 414 aa16.14■□□□□ 0.18
DDX56-205ENST00000433257 FNTAP49354 379 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms