RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 DNAJC21Q5F1R6 531 aaKnown RBP12.52□□□□□ -0.41
CLDN4-202ENST00000431918 CC2D1AQ6P1N0 951 aaPredicted RBP12.52□□□□□ -0.41
CLDN4-202ENST00000431918 KLHL7Q8IXQ5 586 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 FAM20AQ96MK3 541 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 PDE11AQ9HCR9 933 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 ABCB6Q9NP58 842 aa12.52□□□□□ -0.41
CLDN4-202ENST00000431918 LRP5O75197 1615 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 MSH4O15457 936 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 BRD3Q15059 726 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 GBP6Q6ZN66 633 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 FAM186BQ8IYM0 893 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 IRS2Q9Y4H2 1338 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 A0A1W2PRG0 241 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 FAM86B1E9PN63 330 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 AFPP02771 609 aaKnown RBP12.51□□□□□ -0.41
CLDN4-202ENST00000431918 FAM86B2P0C5J1 330 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 RASA3Q14644 834 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 SH3BP5LQ7L8J4 393 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 NOA1Q8NC60 698 aaKnown RBP12.51□□□□□ -0.41
CLDN4-202ENST00000431918 AGBL1Q96MI9 1066 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 PARVGQ9HBI0 331 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
CLDN4-202ENST00000431918 ZBED4O75132 1171 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 LRRN2O75325 713 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 CAPN2P17655 700 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 C8orf74Q6P047 294 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
CLDN4-202ENST00000431918 CCDC127Q96BQ5 260 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 GCNT4Q9P109 453 aa12.51□□□□□ -0.41
CLDN4-202ENST00000431918 NR3C1P04150 777 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 PBX1P40424 430 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 KNOP1Q1ED39 458 aaKnown RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 ZC2HC1CQ53FD0 456 aaPredicted RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 XKR9Q5GH70 373 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 FAM102BQ5T8I3 360 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 ARHGEF16Q5VV41 709 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 PDGFDQ9GZP0 370 aaPredicted RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 CEP104O60308 925 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 SSR1P43307 286 aaKnown RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 SLC7A5Q01650 507 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 NBPF9Q3BBW0 867 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 FAM151AQ8WW52 585 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 IDI2Q9BXS1 227 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 SUGCTQ9HAC7 445 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 SMARCAL1Q9NZC9 954 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 FEZ2Q9UHY8 353 aaPredicted RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 BTAF1O14981 1849 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 EIF3CLB5ME19 914 aaKnown RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 IPO5O00410 1097 aaKnown RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 GFPT2O94808 682 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 HARSP12081 509 aaKnown RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 SND1Q7KZF4 910 aaKnown RBP eCLIP12.5□□□□□ -0.411e-8■■■■■ 42.2
CLDN4-202ENST00000431918 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
CLDN4-202ENST00000431918 EIF3CQ99613 913 aaKnown RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 PACSIN2Q9UNF0 486 aaPredicted RBP12.5□□□□□ -0.41
CLDN4-202ENST00000431918 LTBP4Q8N2S1 1624 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.49□□□□□ -0.41
CLDN4-202ENST00000431918 CCDC151A5D8V7 595 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 ZBTB39O15060 712 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 EPHB6O15197 1021 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 SPP2Q13103 211 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 CEP55Q53EZ4 464 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 NACC1Q96RE7 527 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 MMS19Q96T76 1030 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 NUCKS1Q9H1E3 243 aaKnown RBP12.49□□□□□ -0.41
CLDN4-202ENST00000431918 KCND1Q9NSA2 647 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 LARSQ9P2J5 1176 aaKnown RBP12.49□□□□□ -0.41
CLDN4-202ENST00000431918 HYOU1Q9Y4L1 999 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 MEIS2O14770 477 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 SNHG28P0DPA3 235 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 HERVK_113P62684 666 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 FGFBP2Q9BYJ0 223 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 WDR11Q9BZH6 1224 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 FAM184BQ9ULE4 1060 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 KCNK3O14649 394 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 SLC9A1P19634 815 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 TNFAIP3P21580 790 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 STAT1P42224 750 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 VSNL1P62760 191 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 ERGIC2Q96RQ1 377 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 DNAJC7Q99615 494 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 RUSC1Q9BVN2 902 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 GLIS2Q9BZE0 524 aaPredicted RBP12.49□□□□□ -0.41
CLDN4-202ENST00000431918 VCPKMTQ9H867 229 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 PIM2Q9P1W9 311 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 ZNRF3Q9ULT6 936 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
CLDN4-202ENST00000431918 TRIM49P0CI25 452 aa12.48□□□□□ -0.41
CLDN4-202ENST00000431918 TRIM49CP0CI26 452 aa12.48□□□□□ -0.41
CLDN4-202ENST00000431918 RPA1P27694 616 aa12.48□□□□□ -0.41
CLDN4-202ENST00000431918 IFI16Q16666 785 aaKnown RBP12.48□□□□□ -0.41
CLDN4-202ENST00000431918 FAM160B2Q86V87 743 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms