RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 C12orf42Q96LP6 360 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 CHP1Q99653 195 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 MAP3K20Q9NYL2 800 aaKnown RBP14.19□□□□□ -0.14
DDX56-204ENST00000431640 VAV3Q9UKW4 847 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 KCNH4Q9UQ05 1017 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 MRFAP1Q9Y605 127 aa14.19□□□□□ -0.14
DDX56-204ENST00000431640 COL11A1P12107 1806 aaPredicted RBP14.18□□□□□ -0.14
DDX56-204ENST00000431640 IGLV3-22A0A075B6J6 115 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 CTAGE9A4FU28 777 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 EYA4O95677 639 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 HNRNPH3P31942 346 aaKnown RBP14.18□□□□□ -0.14
DDX56-204ENST00000431640 MARSP56192 900 aaKnown RBP14.18□□□□□ -0.14
DDX56-204ENST00000431640 SETQ01105 290 aaPredicted RBP14.18□□□□□ -0.14
DDX56-204ENST00000431640 PPATQ06203 517 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 PPIL2Q13356 520 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 PPP2R5CQ13362 524 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 GIT2Q14161 759 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 EDRF1Q3B7T1 1238 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 ARSHQ5FYA8 562 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 SH3D19Q5HYK7 790 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 ZNF569Q5MCW4 686 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 TREML2Q5T2D2 321 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 OTOP1Q7RTM1 612 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 SLC5A5Q92911 643 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 WNK4Q96J92 1243 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 EIF2AK1Q9BQI3 630 aaKnown RBP14.18□□□□□ -0.14
DDX56-204ENST00000431640 SLF1Q9BQI6 1058 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 NUCKS1Q9H1E3 243 aaKnown RBP14.18□□□□□ -0.14
DDX56-204ENST00000431640 AS3MTQ9HBK9 375 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 FAM184BQ9ULE4 1060 aa14.18□□□□□ -0.14
DDX56-204ENST00000431640 A0A0G2JLL6 359 aaPredicted RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 RASSF10A6NK89 507 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 EIF3CLB5ME19 914 aaKnown RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 WDR46O15213 610 aaKnown RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 GAP43P17677 238 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 MKRN3Q13064 507 aaKnown RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 NAA30Q147X3 362 aaPredicted RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 CCDC40Q4G0X9 1142 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 WDR59Q6PJI9 974 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 POTEGQ6S5H5 508 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 POTEEQ6S8J3 1075 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 PRRT2Q7Z6L0 340 aaPredicted RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 SAPCD2Q86UD0 394 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 MCF2L2Q86YR7 1114 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 C2orf69Q8N8R5 385 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 PRPF38AQ8NAV1 312 aaKnown RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 EHBP1Q8NDI1 1231 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 ACRBPQ8NEB7 543 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 EIF3CQ99613 913 aaKnown RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 CARD6Q9BX69 1037 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 WDR11Q9BZH6 1224 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 AGPAT5Q9NUQ2 364 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 CETN3O15182 167 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 PSMD10O75832 226 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 ICAM1P05362 532 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 FDX1P10109 184 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 HUNKP57058 714 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 PPP2R3AQ06190 1150 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 ELF2Q15723 593 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 ERCC6LQ2NKX8 1250 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 GLIPR1L2Q4G1C9 344 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 CEP55Q53EZ4 464 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 LRCH2Q5VUJ6 765 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 RASAL3Q86YV0 1011 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 ZC3H3Q8IXZ2 948 aaKnown RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 CEP112Q8N8E3 955 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 NEK11Q8NG66 645 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 EEF2KMTQ96G04 330 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 HSD17B14Q9BPX1 270 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 KCTD10Q9H3F6 313 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 RPAP3Q9H6T3 665 aaPredicted RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 ARGLU1Q9NWB6 273 aaPredicted RBP14.17□□□□□ -0.14
DDX56-204ENST00000431640 PLAGL2Q9UPG8 496 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 SIK3Q9Y2K2 1263 aa14.17□□□□□ -0.14
DDX56-204ENST00000431640 SMCHD1A6NHR9 2005 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 MEIS1O00470 390 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 FANCGO15287 622 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 KRT86O43790 486 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 CALUO43852 315 aaPredicted RBP14.16□□□□□ -0.14
DDX56-204ENST00000431640 ARHGAP25P42331 645 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 PABPC4Q13310 644 aaKnown RBP eCLIP14.16□□□□□ -0.143e-6■□□□□ 10.1
DDX56-204ENST00000431640 ADAM9Q13443 819 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 TXLNBQ8N3L3 684 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 SCFD1Q8WVM8 642 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 TBC1D5Q92609 795 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 MS4A4AQ96JQ5 239 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 NACC1Q96RE7 527 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 UIMC1Q96RL1 719 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 TANGO6Q9C0B7 1094 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 ZHX3Q9H4I2 956 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 MMRN2Q9H8L6 949 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 NHEJ1Q9H9Q4 299 aaPredicted RBP14.16□□□□□ -0.14
DDX56-204ENST00000431640 KCND2Q9NZV8 630 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 CDC23Q9UJX2 597 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 TRAF3IP3Q9Y228 551 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 TLL2Q9Y6L7 1015 aa14.16□□□□□ -0.14
DDX56-204ENST00000431640 NPHP3-ACAD11A0A0J9YXS1 232 aa14.15□□□□□ -0.14
DDX56-204ENST00000431640 PDXKO00764 312 aa14.15□□□□□ -0.14
DDX56-204ENST00000431640 GAS7O60861 476 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms