RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TMX1Q9H3N1 280 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 EPB41L1Q9H4G0 881 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 MMRN2Q9H8L6 949 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 SLC6A20Q9NP91 592 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 CLDND1Q9NY35 253 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 PTPN22Q9Y2R2 807 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 PCDHA2Q9Y5H9 948 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 DMRT1Q9Y5R6 373 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 NPFFR2Q9Y5X5 522 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 KRIT1O00522 736 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 CKMP06732 381 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 SNRPB2P08579 225 aaKnown RBP3.24□□□□□ -1.89
CDC40-204ENST00000431461 LCP1P13796 627 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 CANXP27824 592 aaKnown RBP3.24□□□□□ -1.89
CDC40-204ENST00000431461 ECI1P42126 302 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 FSTL1Q12841 308 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 RAB33AQ14088 237 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 TAF7LQ5H9L4 462 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 VASNQ6EMK4 673 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 Q6ZSN1 163 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 REXO1L1PQ8IX06 675 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 IFNL2Q8IZJ0 200 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 ST13P5Q8NFI4 369 aaPredicted RBP3.24□□□□□ -1.89
CDC40-204ENST00000431461 CLEC4DQ8WXI8 215 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 PPP1R14AQ96A00 147 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 ZNF408Q9H9D4 720 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 KCND1Q9NSA2 647 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 USP35Q9P2H5 1018 aa3.24□□□□□ -1.89
CDC40-204ENST00000431461 REXO2Q9Y3B8 237 aaKnown RBP3.24□□□□□ -1.89
CDC40-204ENST00000431461 SMAD7O15105 426 aaKnown RBP3.23□□□□□ -1.89
CDC40-204ENST00000431461 TBX1O43435 398 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 CAPNS1P04632 268 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 APPP05067 770 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 ITGAVP06756 1048 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 IFRD2Q12894 506 aaPredicted RBP3.23□□□□□ -1.89
CDC40-204ENST00000431461 PRSS53Q2L4Q9 553 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 DENND5AQ6IQ26 1287 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 ANKS3Q6ZW76 656 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 ZNF627Q7L945 461 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 NOP9Q86U38 636 aaKnown RBP3.23□□□□□ -1.89
CDC40-204ENST00000431461 PPIL6Q8IXY8 311 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 ULK2Q8IYT8 1036 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 FAM169BQ8N8A8 192 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 CACTINQ8WUQ7 758 aaKnown RBP3.23□□□□□ -1.89
CDC40-204ENST00000431461 NEIL1Q96FI4 390 aaPredicted RBP3.23□□□□□ -1.89
CDC40-204ENST00000431461 OR14A2Q96R54 314 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 CCDC113Q9H0I3 377 aa3.23□□□□□ -1.89
CDC40-204ENST00000431461 AURKAIP1Q9NWT8 199 aaPredicted RBP3.23□□□□□ -1.89
CDC40-204ENST00000431461 SLC27A2O14975 620 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 RAMP2O60895 175 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 RAD17O75943 681 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 FBXO21O94952 628 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 ENO2P09104 434 aaPredicted RBP3.22□□□□□ -1.89
CDC40-204ENST00000431461 ZNF888P0CJ79 500 aaPredicted RBP3.22□□□□□ -1.89
CDC40-204ENST00000431461 FAHP16930 419 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 BMP5P22003 454 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 GLRBP48167 497 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 GFRA1P56159 465 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 TUBA3CQ13748 450 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 USP10Q14694 798 aaKnown RBP3.22□□□□□ -1.89
CDC40-204ENST00000431461 NOLC1Q14978 699 aaKnown RBP eCLIP3.22□□□□□ -1.89
CDC40-204ENST00000431461 SF1Q15637 639 aaKnown RBP3.22□□□□□ -1.89
CDC40-204ENST00000431461 DDR2Q16832 855 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 LONRF2Q1L5Z9 754 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 SKIDA1Q1XH10 827 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 FNDC7Q5VTL7 733 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 TUBA3EQ6PEY2 450 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 MAMDC4Q6UXC1 1216 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 DPH6Q7L8W6 267 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 ZNF227Q86WZ6 799 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 IL17DQ8TAD2 202 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 C1orf159Q96HA4 380 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 MRFAP1L1Q96HT8 127 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 SGSM3Q96HU1 749 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 DPYSL5Q9BPU6 564 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 TTPALQ9BTX7 342 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 OSBPL2Q9H1P3 480 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 ZNF703Q9H7S9 590 aaPredicted RBP3.22□□□□□ -1.89
CDC40-204ENST00000431461 ARHGAP20Q9P2F6 1191 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 ZFP69BQ9UJL9 534 aa3.22□□□□□ -1.89
CDC40-204ENST00000431461 CCDC163A0A0D9SF12 145 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 H0Y858 1186 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 KLF4O43474 513 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 IL18BPO95998 194 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 CR2P20023 1033 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 KCNJ6P48051 423 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 RRADP55042 308 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 RAC3P60763 192 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 PFKPQ01813 784 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 GRIN1Q05586 938 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 RASGRF1Q13972 1273 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 SV2CQ496J9 727 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 PAN2Q504Q3 1202 aaKnown RBP3.21□□□□□ -1.9
CDC40-204ENST00000431461 SLC35F1Q5T1Q4 408 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 POLNQ7Z5Q5 900 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 LRRC47Q8N1G4 583 aaKnown RBP3.21□□□□□ -1.9
CDC40-204ENST00000431461 ZNF808Q8N4W9 903 aaPredicted RBP3.21□□□□□ -1.9
CDC40-204ENST00000431461 STPG3Q8N7X2 389 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 TMEM145Q8NBT3 493 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 PIP4K2CQ8TBX8 421 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms