RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 LMNAP02545 664 aaKnown RBP11.65□□□□□ -0.54
ATG4B-212ENST00000430617 HOXC8P31273 242 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 TDO2P48775 406 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 CLCN5P51795 746 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 HAND2P61296 217 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 KRT32Q14532 448 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 DCLK2Q8N568 766 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 ATP6V0A1Q93050 837 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 EMID1Q96A84 441 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-212ENST00000430617 MPHOSPH6Q99547 160 aaKnown RBP11.65□□□□□ -0.54
ATG4B-212ENST00000430617 NACAP1Q9BZK3 213 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 TLE6Q9H808 572 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 ZSWIM6Q9HCJ5 1215 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 IL17RBQ9NRM6 502 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
ATG4B-212ENST00000430617 NEDD4P46934 1319 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 E7EWF7 191 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 SORBS3O60504 671 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 APPP05067 770 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 ASGR2P07307 311 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 HOXD8P13378 290 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-212ENST00000430617 NPR3P17342 541 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 KCNC3Q14003 757 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 RSPO4Q2I0M5 234 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-212ENST00000430617 CCDC96Q2M329 555 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 SYCE2Q6PIF2 218 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 BTNL9Q6UXG8 535 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 CCDC105Q8IYK2 499 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 PPTC7Q8NI37 304 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 TBC1D5Q92609 795 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 APBB2Q92870 758 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 TAAR1Q96RJ0 339 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 C16orf70Q9BSU1 422 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 MFSD1Q9H3U5 465 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 COL20A1Q9P218 1284 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 STX8Q9UNK0 236 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 R4GN57 208 aa11.64□□□□□ -0.55
ATG4B-212ENST00000430617 C17orf102A2RUQ5 167 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 C2CD4DB7Z1M9 353 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 ENPP3O14638 875 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 ZNF213O14771 459 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 CPA1P15085 419 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 RPS6KB1P23443 525 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 PPARAQ07869 468 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 HSDL1Q3SXM5 330 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 SYDE2Q5VT97 1194 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 RUFY3Q7L099 469 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 MB21D2Q8IYB1 491 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-212ENST00000430617 FLCNQ8NFG4 579 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 IPO9Q96P70 1041 aaKnown RBP11.63□□□□□ -0.55
ATG4B-212ENST00000430617 NEK1Q96PY6 1258 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 RNPEPQ9H4A4 650 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 ZNF287Q9HBT7 754 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 PATJQ8NI35 1801 aa11.63□□□□□ -0.55
ATG4B-212ENST00000430617 FRMPD2Q68DX3 1309 aaPredicted RBP11.62□□□□□ -0.55
ATG4B-212ENST00000430617 FASNP49327 2511 aaKnown RBP11.62□□□□□ -0.55
ATG4B-212ENST00000430617 RALGAPA1Q6GYQ0 2036 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 GPR179Q6PRD1 2367 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 CHRNA1P02708 482 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 SMIM10L2AP0DMW4 78 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 SMIM10L2BP0DMW5 78 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 AOC1P19801 751 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 PSMA5P28066 241 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 NEK4P51957 841 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 LAMC2Q13753 1193 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 DUSP6Q16828 381 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 NAALADL2Q58DX5 795 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 ANKRD54Q6NXT1 300 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 BLOC1S2Q6QNY1 142 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 CRIPAKQ8N1N5 446 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 DTWD2Q8NBA8 298 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 CYP2W1Q8TAV3 490 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 GPCPD1Q9NPB8 672 aa11.62□□□□□ -0.55
ATG4B-212ENST00000430617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
ATG4B-212ENST00000430617 WDR19Q8NEZ3 1342 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 B4DLN1 442 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 PPFIA4O75335 1185 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 FGRP09769 529 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 GHRP10912 638 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 TECP42680 631 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 GATMP50440 423 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 MRPL12P52815 198 aaKnown RBP11.61□□□□□ -0.55
ATG4B-212ENST00000430617 ANTXR2P58335 489 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 ERVFC1P60507 584 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 PAN2Q504Q3 1202 aaKnown RBP11.61□□□□□ -0.55
ATG4B-212ENST00000430617 FAM26DQ5JW98 314 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 MYSM1Q5VVJ2 828 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 TMEM184AQ6ZMB5 413 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 HSCBQ8IWL3 235 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 MICAL1Q8TDZ2 1067 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 DCAF4Q8WV16 495 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 LINC01599Q8WXQ3 324 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 HINFPQ9BQA5 517 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 POMKQ9H5K3 350 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 NR2E1Q9Y466 385 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 CYP46A1Q9Y6A2 500 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 FRYQ5TBA9 3013 aa11.61□□□□□ -0.55
ATG4B-212ENST00000430617 ANKRD11Q6UB99 2663 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms