RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 CCDC28BQ9BUN5 200 aa15.2■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.2■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 STMN4Q9H169 189 aaPredicted RBP15.2■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 LRMDAQ9H2I8 198 aa15.2■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 LRCH1Q9Y2L9 728 aa15.2■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 UNC5CO95185 931 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 LONP1P36776 959 aaKnown RBP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 STAT6P42226 847 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 FKBP4Q02790 459 aaKnown RBP eCLIP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ACBD5Q5T8D3 534 aaPredicted RBP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ARL6IP4Q66PJ3 421 aaKnown RBP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 HGSNATQ68CP4 663 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PDXDC1Q6P996 788 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 LRP10Q7Z4F1 713 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ARHGAP18Q8N392 663 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 KIF2BQ8N4N8 673 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 USHBP1Q8N6Y0 703 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 TAF4BQ92750 862 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 MKL1Q969V6 931 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 TMEM237Q96Q45 408 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 DNAAF2Q9NVR5 837 aaKnown RBP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 NKX1-2Q9UD57 310 aaPredicted RBP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PRKAG3Q9UGI9 489 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 SCOCQ9UIL1 159 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 AKAP11Q9UKA4 1901 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 LRRC53A6NM62 1247 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PGRMC1O00264 195 aaKnown RBP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ATP5HO75947 161 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 FTCDO95954 541 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 TPP2P29144 1249 aaPredicted RBP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 CD151P48509 253 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PTGDRQ13258 359 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 BTNL9Q6UXG8 535 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 AGGF1Q8N302 714 aaeCLIP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 KCNV2Q8TDN2 545 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PIGOQ8TEQ8 1089 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 DNAJC9Q8WXX5 260 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 MMADHCQ9H3L0 296 aaPredicted RBP15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 TXLNGQ9NUQ3 528 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 STK38LQ9Y2H1 464 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RGPD8O14715 1765 aaPredicted RBP15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 UPP2O95045 317 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ZBTB48P10074 688 aaPredicted RBP15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 USP11P51784 963 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RAD23BP54727 409 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 NLRP5P59047 1200 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 GFPT1Q06210 699 aaPredicted RBP15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 USP4Q13107 963 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 SETDB1Q15047 1291 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ESCO1Q5FWF5 840 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 EARS2Q5JPH6 523 aaKnown RBP15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 DDX42Q86XP3 938 aaKnown RBP eCLIP15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 TMTC2Q8N394 836 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ANKRD13CQ8N6S4 541 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RBBP8NLQ8NC74 664 aaPredicted RBP15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PTPRN2Q92932 1015 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 SHISA4Q96DD7 197 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PRMT1Q99873 361 aaKnown RBP15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 SELENOSQ9BQE4 189 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 EPB41L4BQ9H329 900 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 MAGEF1Q9HAY2 307 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 DLGAP2Q9P1A6 1054 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RGPD2P0DJD1 1756 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ATP8B3O60423 1300 aa15.18■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 A0A087WZG4 1122 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 EPHB6O15197 1021 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ADD2P35612 726 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RFC5P40937 340 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RPS6KA1Q15418 735 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 WASHC2DQ5SRD0 308 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 FOXB2Q5VYV0 432 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RNF43Q68DV7 783 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 COPS6Q7L5N1 327 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 UTP4Q969X6 686 aaKnown RBP15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 MTFR1LQ9H019 292 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 VCX3BQ9H321 246 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PABPC3Q9H361 631 aaKnown RBP15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 VCX3AQ9NNX9 186 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ZSWIM5Q9P217 1185 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 CNOT7Q9UIV1 285 aaKnown RBP15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 MYH4Q9Y623 1939 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 WNT7AO00755 349 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 DAPK3O43293 454 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 LMNAP02545 664 aaKnown RBP15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 SHBGP04278 402 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 PDHA1P08559 390 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 NLRP6P59044 892 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 EHHADHQ08426 723 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 MKRN3Q13064 507 aaKnown RBP15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 ACVR2BQ13705 512 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 CNGA2Q16280 664 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 VWA3BQ502W6 1294 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 C6orf118Q5T5N4 469 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RNF220Q5VTB9 566 aa15.17■□□□□ 0.02
CSNK1A1P1-201ENST00000430593 RASGEF1CQ8N431 466 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms