RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 PPFIA1Q13136 1202 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 TOB2Q14106 344 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 KRT32Q14532 448 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 TJAP1Q5JTD0 557 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 FAM26DQ5JW98 314 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 JAKMIP3Q5VZ66 844 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 MYOCDQ8IZQ8 938 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 AGO4Q9HCK5 861 aaKnown RBP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 JPH1Q9HDC5 661 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 TUBE1Q9UJT0 475 aa13.48□□□□□ -0.25
HDAC4-202ENST00000430200 NAP1L2Q9ULW6 460 aaPredicted RBP13.48□□□□□ -0.25
HDAC4-202ENST00000430200 SMCO2A6NFE2 343 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 DDX39AO00148 427 aaKnown RBP13.47□□□□□ -0.25
HDAC4-202ENST00000430200 LINC00271P0C7V0 271 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 GHRP10912 638 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 SCG2P13521 617 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 ACTR2P61160 394 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 IGBP1P78318 339 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 IKBKEQ14164 716 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 LPIN1Q14693 890 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 SYNE3Q6ZMZ3 975 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
HDAC4-202ENST00000430200 EHMT1Q9H9B1 1298 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 SUGCTQ9HAC7 445 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 RC3H2Q9HBD1 1191 aaKnown RBP13.47□□□□□ -0.25
HDAC4-202ENST00000430200 SLC9A2Q9UBY0 812 aa13.47□□□□□ -0.25
HDAC4-202ENST00000430200 NFASCO94856 1347 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 NRCAMQ92823 1304 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 hCG_1984214I3L0E3 225 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 MEIS1O00470 390 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.25
HDAC4-202ENST00000430200 CAND2O75155 1236 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 INSRRP14616 1297 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 ERVK-21P61565 698 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 AP3B2Q13367 1082 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 PLCB4Q15147 1175 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 CEP55Q53EZ4 464 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 BLOC1S2Q6QNY1 142 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-202ENST00000430200 ZNF713Q8N859 430 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-202ENST00000430200 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
HDAC4-202ENST00000430200 DNAJB3Q8WWF6 145 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 LENG9Q96B70 501 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 CDHR1Q96JP9 859 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 ASB2Q96Q27 587 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 RAD9AQ99638 391 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 ZBED2Q9BTP6 218 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 IFIH1Q9BYX4 1025 aaKnown RBP13.46□□□□□ -0.25
HDAC4-202ENST00000430200 AGO3Q9H9G7 860 aaKnown RBP13.46□□□□□ -0.25
HDAC4-202ENST00000430200 ERAP1Q9NZ08 941 aa13.46□□□□□ -0.25
HDAC4-202ENST00000430200 IGKV6D-21A0A0A0MT36 114 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 ESYT2A0FGR8 921 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 ZBTB42B2RXF5 422 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 ATP4AP20648 1035 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 TMEM62Q0P6H9 643 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 FBXO47Q5MNV8 452 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 FBXL16Q8N461 479 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 ADAMTS19Q8TE59 1207 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 GLG1Q92896 1179 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 UPF3BQ9BZI7 483 aaKnown RBP13.45□□□□□ -0.26
HDAC4-202ENST00000430200 ZMYND12Q9H0C1 365 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 FAM49AQ9H0Q0 323 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-202ENST00000430200 VPS54Q9P1Q0 977 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 CDY2AQ9Y6F7 541 aa13.45□□□□□ -0.26
HDAC4-202ENST00000430200 KIF28PB7ZC32 967 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 EFCAB14O75071 495 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 UPP2O95045 317 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 ATG7O95352 703 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 HMGB1P09429 215 aaKnown RBP13.44□□□□□ -0.26
HDAC4-202ENST00000430200 PDIA3P30101 505 aaKnown RBP13.44□□□□□ -0.26
HDAC4-202ENST00000430200 EVCP57679 992 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 CCT2P78371 535 aaKnown RBP13.44□□□□□ -0.26
HDAC4-202ENST00000430200 NPY5RQ15761 445 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 ATXN2LQ8WWM7 1075 aaKnown RBP13.44□□□□□ -0.26
HDAC4-202ENST00000430200 SEPT8Q92599 483 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 TGS1Q96RS0 853 aaKnown RBP13.44□□□□□ -0.26
HDAC4-202ENST00000430200 SMARCAD1Q9H4L7 1026 aa13.44□□□□□ -0.26
HDAC4-202ENST00000430200 PRPF3O43395 683 aaKnown RBP13.43□□□□□ -0.26
HDAC4-202ENST00000430200 FOSP01100 380 aaPredicted RBP13.43□□□□□ -0.26
HDAC4-202ENST00000430200 AMHP03971 560 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 GNAT1P11488 350 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 BMP1P13497 986 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 MRPS6P82932 125 aaKnown RBP13.43□□□□□ -0.26
HDAC4-202ENST00000430200 TAF2Q6P1X5 1199 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 PLA2G4DQ86XP0 818 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 REXO1Q8N1G1 1221 aaKnown RBP13.43□□□□□ -0.26
HDAC4-202ENST00000430200 GJA10Q969M2 543 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 TOP1MTQ969P6 601 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 SLC26A6Q9BXS9 759 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
HDAC4-202ENST00000430200 MAFGO15525 162 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 CYP3A4P08684 503 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 IFNAR1P17181 557 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 CD52P31358 61 aa13.42□□□□□ -0.26
HDAC4-202ENST00000430200 MRPS5P82675 430 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms