RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 FANCLQ9NW38 375 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 SMG5Q9UPR3 1016 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 RIMS1Q86UR5 1692 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 NEURL1BA8MQ27 555 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 KCNA3P22001 575 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 SMARCA1P28370 1054 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 SLC5A9Q2M3M2 681 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 ZBTB10Q96DT7 871 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 OLFM1Q99784 485 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 DBNDD2Q9BQY9 259 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 FTOQ9C0B1 505 aaKnown RBP eCLIP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 METTL14Q9HCE5 456 aaKnown RBP8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 CLIC4Q9Y696 253 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 PARP3Q9Y6F1 533 aa8.12□□□□□ -1.11
SYNPO2-202ENST00000429713 GGPS1O95749 300 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT3P12035 628 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 PLA2G4AP47712 749 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 BTNL9Q6UXG8 535 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MREGQ8N565 214 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MAP4K1Q92918 833 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 CYTH2Q99418 400 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MOV10Q9HCE1 1003 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 ATP6V0A2Q9Y487 856 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 USP15Q9Y4E8 981 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 ZMYM6O95789 1325 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 SYNGAP1Q96PV0 1343 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 CTNNA2P26232 953 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 TRMT44Q8IYL2 757 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MORC4Q8TE76 937 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 ZWILCHQ9H900 591 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 ARHGAP26Q9UNA1 814 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 GGCXP38435 758 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 SERPINB3P29508 390 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 ZNF579Q8NAF0 562 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 PPP4R1Q8TF05 950 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 PICK1Q9NRD5 415 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 SYBUQ9NX95 663 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 DDX25Q9UHL0 483 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MRPL11Q9Y3B7 192 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 A0A1W2PQC6 194 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MARK3P27448 753 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 GNA11P29992 359 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MED21Q13503 144 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 DPCR1Q3MIW9 517 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 BZW1Q7L1Q6 419 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 RASGRP2Q7LDG7 609 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MIGA1Q8NAN2 632 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 ICA1LQ8NDH6 482 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 PLBD2Q8NHP8 589 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 PAWRQ96IZ0 340 aaKnown RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 VWDEQ8N2E2 1590 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 XAGE2Q96GT9 111 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 PDE4DIPQ5VU43 2346 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 PXDNLA1KZ92 1463 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MED23Q9ULK4 1368 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 ZBED6P86452 979 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 CDK17Q00537 523 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MTHFD1LQ6UB35 978 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 CSGALNACT2Q8N6G5 542 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 DDHD1Q8NEL9 900 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 MYCBPAPQ8TBZ2 947 aa8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 C6orf203Q9P0P8 240 aaPredicted RBP8.11□□□□□ -1.11
SYNPO2-202ENST00000429713 SMAPO00193 183 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 DSG1Q02413 1049 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 BLMHQ13867 455 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PPP4R4Q6NUP7 873 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 RBM46Q8TBY0 533 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 INPP5DQ92835 1189 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 CARD9Q9H257 536 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 LOXHD1Q8IVV2 1947 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 CDHR2Q9BYE9 1310 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 ARAP3Q8WWN8 1544 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 MIF4GDA9UHW6 222 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 ZBED4O75132 1171 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PPP6R2O75170 966 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PYGBP11216 843 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 KCNA2P16389 499 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 RAP1GAPP47736 663 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 THOC7Q6I9Y2 204 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 TRAIPQ9BWF2 469 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 FHDC1Q9C0D6 1143 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 TAF1DQ9H5J8 278 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 TULP4Q9NRJ4 1543 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 EVPLLA8MZ36 301 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 LAD1O00515 517 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 CAND2O75155 1236 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT15P19012 456 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 ECE1P42892 770 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PTGISQ16647 500 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PDCD4Q53EL6 469 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 THRAP3Q9Y2W1 955 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 MROH7-TTC4A0A0A0MT08 1334 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 GCKRQ14397 625 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 E2F5Q15329 346 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 FAM133BQ5BKY9 247 aaKnown RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 CD302Q8IX05 232 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 ALDH16A1Q8IZ83 802 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 CRACR2BQ8N4Y2 399 aaPredicted RBP8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 PSMB7Q99436 277 aa8.1□□□□□ -1.11
SYNPO2-202ENST00000429713 SLF1Q9BQI6 1058 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms