RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 DDX39AO00148 427 aaKnown RBP19.08■□□□□ 0.64
PRDM5-203ENST00000428209 CETN3O15182 167 aa19.08■□□□□ 0.64
PRDM5-203ENST00000428209 PRPF6O94906 941 aaKnown RBP19.08■□□□□ 0.64
PRDM5-203ENST00000428209 ABL1P00519 1130 aa19.08■□□□□ 0.64
PRDM5-203ENST00000428209 BCRP11274 1271 aa19.08■□□□□ 0.64
PRDM5-203ENST00000428209 GHRHRQ02643 423 aa19.08■□□□□ 0.64
PRDM5-203ENST00000428209 LRRN4CLQ8ND94 238 aa19.08■□□□□ 0.64
PRDM5-203ENST00000428209 TRPM4Q8TD43 1214 aa19.08■□□□□ 0.64
PRDM5-203ENST00000428209 SPON1Q9HCB6 807 aa19.08■□□□□ 0.64
PRDM5-203ENST00000428209 MAP3K20Q9NYL2 800 aaKnown RBP19.08■□□□□ 0.64
PRDM5-203ENST00000428209 SFI1A8K8P3 1242 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 EPHB6O15197 1021 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 PTPRAP18433 802 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 NR2F2P24468 414 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 RPS6P62753 249 aaKnown RBP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 MAP3K9P80192 1104 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 B3GNT9Q6UX72 402 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 C1orf186Q6ZWK4 172 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 CCDC155Q8N6L0 562 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 MNS1Q8NEH6 495 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 BCAS3Q9H6U6 928 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 NHEJ1Q9H9Q4 299 aaPredicted RBP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 REXO2Q9Y3B8 237 aaKnown RBP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 VWA5AO00534 786 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 FAM13AO94988 1023 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 GCNT3O95395 438 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 GAP43P17677 238 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 CYLC1P35663 651 aaPredicted RBP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 ARHGAP25P42331 645 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 MARSP56192 900 aaKnown RBP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 ELF2Q15723 593 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 PCNX4Q63HM2 1172 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 ZC3H3Q8IXZ2 948 aaKnown RBP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 SMCR8Q8TEV9 937 aaPredicted RBP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 TRERF1Q96PN7 1200 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 TAAR1Q96RJ0 339 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 GPRC5DQ9NZD1 345 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 WRAP73Q9P2S5 460 aaPredicted RBP19.07■□□□□ 0.64
PRDM5-203ENST00000428209 PNMA2Q9UL42 364 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 TRAF3IP3Q9Y228 551 aa19.07■□□□□ 0.64
PRDM5-203ENST00000428209 DOCK1Q14185 1865 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 FDX1P10109 184 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 HOXD13P35453 343 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 TKFCQ3LXA3 575 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 NIPA1Q7RTP0 329 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 TRIM59Q8IWR1 403 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 MYCT1Q8N699 235 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 SAMD3Q8N6K7 520 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 BANK1Q8NDB2 785 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 NEK11Q8NG66 645 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 ATG4CQ96DT6 458 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 LXNQ9BS40 222 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 CARD6Q9BX69 1037 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 OLFML3Q9NRN5 406 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 PLAGL2Q9UPG8 496 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 ZHX2Q9Y6X8 837 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 PDXKO00764 312 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 CALUO43852 315 aaPredicted RBP19.06■□□□□ 0.64
PRDM5-203ENST00000428209 EIF2AK2P19525 551 aaKnown RBP19.06■□□□□ 0.64
PRDM5-203ENST00000428209 KRT83P78385 493 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 MRPS9P82933 396 aaKnown RBP19.06■□□□□ 0.64
PRDM5-203ENST00000428209 CCDC170Q8IYT3 715 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 GGA3Q9NZ52 723 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 UBIAD1Q9Y5Z9 338 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 MRFAP1Q9Y605 127 aa19.06■□□□□ 0.64
PRDM5-203ENST00000428209 SOCS7O14512 581 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 IPO7O95373 1038 aaKnown RBP19.05■□□□□ 0.64
PRDM5-203ENST00000428209 CDK17Q00537 523 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 KCNMA1Q12791 1236 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 ERCC6LQ2NKX8 1250 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 RNF207Q6ZRF8 634 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 ARHGAP27Q6ZUM4 889 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 MIER3Q7Z3K6 550 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 WNK4Q96J92 1243 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 JADE2Q9NQC1 790 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 RBBP6Q7Z6E9 1792 aaKnown RBP19.05■□□□□ 0.64
PRDM5-203ENST00000428209 HMGCS2P54868 508 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 MTMR1Q13613 665 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 BMT2Q1RMZ1 405 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 NSMFQ6X4W1 530 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 RRAGAQ7L523 313 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 SLC35F6Q8N357 371 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 PARVGQ9HBI0 331 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 AGO4Q9HCK5 861 aaKnown RBP19.05■□□□□ 0.64
PRDM5-203ENST00000428209 MYO1AQ9UBC5 1043 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 FAM184BQ9ULE4 1060 aa19.05■□□□□ 0.64
PRDM5-203ENST00000428209 HNRNPH3P31942 346 aaKnown RBP19.04■□□□□ 0.64
PRDM5-203ENST00000428209 HERVK_113P62684 666 aa19.04■□□□□ 0.64
PRDM5-203ENST00000428209 PGM5Q15124 567 aa19.04■□□□□ 0.64
PRDM5-203ENST00000428209 CACNA2D4Q7Z3S7 1137 aa19.04■□□□□ 0.64
PRDM5-203ENST00000428209 NEK9Q8TD19 979 aa19.04■□□□□ 0.64
PRDM5-203ENST00000428209 RMDN3Q96TC7 470 aa19.04■□□□□ 0.64
PRDM5-203ENST00000428209 HAUS4Q9H6D7 363 aa19.04■□□□□ 0.64
PRDM5-203ENST00000428209 TYW1Q9NV66 732 aaKnown RBP19.04■□□□□ 0.64
PRDM5-203ENST00000428209 CGNQ9P2M7 1197 aaKnown RBP19.04■□□□□ 0.64
PRDM5-203ENST00000428209 GUCA1BQ9UMX6 200 aa19.04■□□□□ 0.64
PRDM5-203ENST00000428209 DHX15O43143 795 aaKnown RBP19.03■□□□□ 0.64
PRDM5-203ENST00000428209 MYCLP12524 364 aaPredicted RBP19.03■□□□□ 0.64
PRDM5-203ENST00000428209 EPS15P42566 896 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms