RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TCF7P36402 384 aaPredicted RBP10.38□□□□□ -0.75
SMC1A-203ENST00000428014 PSMC6P62333 389 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 TRIM71Q2Q1W2 868 aaKnown RBP10.38□□□□□ -0.75
SMC1A-203ENST00000428014 FAM26DQ5JW98 314 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 TMEM240Q5SV17 173 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 LENG9Q96B70 501 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 KIF2CQ99661 725 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 TRPV6Q9H1D0 765 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 WNT8AQ9H1J5 351 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 AZI2Q9H6S1 392 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 NCOA5Q9HCD5 579 aaKnown RBP10.38□□□□□ -0.75
SMC1A-203ENST00000428014 HDAC6Q9UBN7 1215 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 PPME1Q9Y570 386 aa10.38□□□□□ -0.75
SMC1A-203ENST00000428014 C17orf102A2RUQ5 167 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 FGBP02675 491 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 CSF2RAP15509 400 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 ZNF76P36508 570 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 NONOQ15233 471 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMC1A-203ENST00000428014 SHHQ15465 462 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 ME3Q16798 604 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 GDF6Q6KF10 455 aaPredicted RBP10.37□□□□□ -0.75
SMC1A-203ENST00000428014 B3GNT9Q6UX72 402 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 ABHD15Q6UXT9 468 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 PLA2G4DQ86XP0 818 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 NME8Q8N427 588 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 USP38Q8NB14 1042 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 NSUN7Q8NE18 718 aaKnown RBP10.37□□□□□ -0.75
SMC1A-203ENST00000428014 FAM167AQ96KS9 214 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 FAM20AQ96MK3 541 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 BRMS1Q9HCU9 246 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 TRMT13Q9NUP7 481 aaKnown RBP10.37□□□□□ -0.75
SMC1A-203ENST00000428014 VPS54Q9P1Q0 977 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 TCEAL9Q9UHQ7 104 aa10.37□□□□□ -0.75
SMC1A-203ENST00000428014 KDM3AQ9Y4C1 1321 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 ABHD14A-ACY1A0A1B0GW23 586 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 ST18O60284 1047 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 HBP1O60381 514 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 CTDNEP1O95476 244 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 SMIM10L2AP0DMW4 78 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 SMIM10L2BP0DMW5 78 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 JAK3P52333 1124 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 ACTR2P61160 394 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 ITGB3BPQ13352 177 aaPredicted RBP10.36□□□□□ -0.75
SMC1A-203ENST00000428014 FAM47CQ5HY64 1035 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 JAKMIP3Q5VZ66 844 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 FAM160B1Q5W0V3 765 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 MIS18BP1Q6P0N0 1132 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 C16orf59Q7L2K0 433 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 RSPH3Q86UC2 560 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 APBB2Q92870 758 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 SLC5A5Q92911 643 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 VWCEQ96DN2 955 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 RNPC3Q96LT9 517 aaKnown RBP10.36□□□□□ -0.75
SMC1A-203ENST00000428014 SLC9A7Q96T83 725 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.36□□□□□ -0.757e-6■□□□□ 9.4
SMC1A-203ENST00000428014 RNPEPQ9H4A4 650 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 ORC3Q9UBD5 711 aaPredicted RBP10.36□□□□□ -0.75
SMC1A-203ENST00000428014 CEP131Q9UPN4 1083 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 KIF3AQ9Y496 699 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 PCDHA10Q9Y5I2 948 aa10.36□□□□□ -0.75
SMC1A-203ENST00000428014 MAFBQ9Y5Q3 323 aaPredicted RBP10.36□□□□□ -0.75
SMC1A-203ENST00000428014 COL4A6Q14031 1691 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 WDR64B1ANS9 1081 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 DKC1O60832 514 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMC1A-203ENST00000428014 PSMD10O75832 226 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 ZNF286BP0CG31 522 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 ARP10275 920 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 CKBP12277 381 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 FDPSP14324 419 aaKnown RBP10.35□□□□□ -0.75
SMC1A-203ENST00000428014 PTGS1P23219 599 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 CYP2C18P33260 490 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 STAT5BP51692 787 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 CDC42EP1Q00587 391 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 RAB30Q15771 203 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 CNKSR3Q6P9H4 555 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 TRAF7Q6Q0C0 670 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 LRRC8DQ7L1W4 858 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 NEK8Q86SG6 692 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 EXOC8Q8IYI6 725 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 CYP2W1Q8TAV3 490 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 TBCKQ8TEA7 893 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 ATP8B4Q8TF62 1192 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 DHX38Q92620 1227 aaKnown RBP10.35□□□□□ -0.75
SMC1A-203ENST00000428014 TNFRSF25Q93038 417 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 ATP6V0A1Q93050 837 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 TBC1D32Q96NH3 1257 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 ZNF577Q9BSK1 485 aa10.35□□□□□ -0.75
SMC1A-203ENST00000428014 IGSF9BQ9UPX0 1349 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 TRIP12Q14669 1992 aaPredicted RBP10.34□□□□□ -0.75
SMC1A-203ENST00000428014 CCDC194A0A1B0GVG4 234 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 SMIM35A0A1B0GVV1 85 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 MAGEB2O15479 319 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 EDIL3O43854 480 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 MMP1P03956 469 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 PSAPP07602 524 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 CYP2C9P11712 490 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 TRAPPC10P48553 1259 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 EPHB4P54760 987 aa10.34□□□□□ -0.75
SMC1A-203ENST00000428014 ZNF484Q5JVG2 852 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms