RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 GBF1Q92538 1859 aa20.94■□□□□ 0.94
GPC1-205ENST00000427506 IGLV3-22A0A075B6J6 115 aa20.94■□□□□ 0.94
GPC1-205ENST00000427506 RRN3P2A6NIE6 340 aa20.94■□□□□ 0.94
GPC1-205ENST00000427506 IPO5O00410 1097 aaKnown RBP20.94■□□□□ 0.94
GPC1-205ENST00000427506 BACH1O14867 736 aa20.94■□□□□ 0.94
GPC1-205ENST00000427506 IGFBP4P22692 258 aa20.94■□□□□ 0.94
GPC1-205ENST00000427506 SETQ01105 290 aaPredicted RBP20.94■□□□□ 0.94
GPC1-205ENST00000427506 TAF2Q6P1X5 1199 aa20.94■□□□□ 0.94
GPC1-205ENST00000427506 TMCO2Q7Z6W1 182 aaPredicted RBP20.94■□□□□ 0.94
GPC1-205ENST00000427506 SEPT8Q92599 483 aa20.94■□□□□ 0.94
GPC1-205ENST00000427506 SLKQ9H2G2 1235 aaPredicted RBP20.94■□□□□ 0.94
GPC1-205ENST00000427506 TCEAL9Q9UHQ7 104 aa20.94■□□□□ 0.94
GPC1-205ENST00000427506 TET1Q8NFU7 2136 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 RBAK-RBAKDNI3L0D1 243 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 INSRRP14616 1297 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 PRR16Q569H4 304 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 PLEKHG4Q58EX7 1191 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 RUFY4Q6ZNE9 571 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 PLPPR4Q7Z2D5 763 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.93■□□□□ 0.94
GPC1-205ENST00000427506 PPM1EQ8WY54 764 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 TBC1D22BQ9NU19 505 aa20.93■□□□□ 0.94
GPC1-205ENST00000427506 CDKL5O76039 1030 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 ATG7O95352 703 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 CCNE2O96020 404 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 PLCB4Q15147 1175 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 ANKRD1Q15327 319 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 FAM160B1Q5W0V3 765 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 MIS18BP1Q6P0N0 1132 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 FAM117BQ6P1L5 589 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 CERS4Q9HA82 394 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 PCDHA4Q9UN74 947 aa20.92■□□□□ 0.94
GPC1-205ENST00000427506 POTEB3A0JP26 581 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 AMHP03971 560 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 COL6A3P12111 3177 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 CIITAP33076 1130 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 SLC26A2P50443 739 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 SCRN1Q12765 414 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 FAM26DQ5JW98 314 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 MARCH8Q5T0T0 291 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 POTEBQ6S5H4 581 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 ABHD15Q6UXT9 468 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.91■□□□□ 0.94
GPC1-205ENST00000427506 DNAJB3Q8WWF6 145 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 C22orf23Q9BZE7 217 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 FAM49AQ9H0Q0 323 aaPredicted RBP20.91■□□□□ 0.94
GPC1-205ENST00000427506 ZNF302Q9NR11 478 aa20.91■□□□□ 0.94
GPC1-205ENST00000427506 MBLAC1A4D2B0 266 aaPredicted RBP20.9■□□□□ 0.94
GPC1-205ENST00000427506 DHX15O43143 795 aaKnown RBP20.9■□□□□ 0.94
GPC1-205ENST00000427506 GJB5O95377 273 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 ADGRE1Q14246 886 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 SWSAP1Q6NVH7 229 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 PDXDC2PQ6P474 469 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 RPAINQ86UA6 219 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 MYOCDQ8IZQ8 938 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 BLIDQ8IZY5 108 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 ZBTB10Q96DT7 871 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 AIFM3Q96NN9 605 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 RAD9AQ99638 391 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 IFIH1Q9BYX4 1025 aaKnown RBP20.9■□□□□ 0.94
GPC1-205ENST00000427506 OSBPL7Q9BZF2 842 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 TPCN1Q9ULQ1 816 aa20.9■□□□□ 0.94
GPC1-205ENST00000427506 IGKV6D-21A0A0A0MT36 114 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 PFKFB2O60825 505 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 CHRNA1P02708 482 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 RPLP2P05387 115 aaKnown RBP20.89■□□□□ 0.93
GPC1-205ENST00000427506 GHRP10912 638 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 USP11P51784 963 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 AK2P54819 239 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 TAP1Q03518 808 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 ZNF746Q6NUN9 644 aaPredicted RBP20.89■□□□□ 0.93
GPC1-205ENST00000427506 CCDC60Q8IWA6 550 aaPredicted RBP20.89■□□□□ 0.93
GPC1-205ENST00000427506 CKAP2LQ8IYA6 745 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 TBCKQ8TEA7 893 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 TRAPPC12Q8WVT3 735 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 ARNTL2Q8WYA1 636 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 APBB2Q92870 758 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 SAMM50Q9Y512 469 aa20.89■□□□□ 0.93
GPC1-205ENST00000427506 LCHNA4D1U4 455 aa20.88■□□□□ 0.93
GPC1-205ENST00000427506 HBP1O60381 514 aa20.88■□□□□ 0.93
GPC1-205ENST00000427506 XBP1P17861 261 aa20.88■□□□□ 0.93
GPC1-205ENST00000427506 KRT76Q01546 638 aa20.88■□□□□ 0.93
GPC1-205ENST00000427506 CCDC85BQ15834 202 aaPredicted RBP20.88■□□□□ 0.93
GPC1-205ENST00000427506 GALNT17Q6IS24 598 aa20.88■□□□□ 0.93
GPC1-205ENST00000427506 CDY2AQ9Y6F7 541 aa20.88■□□□□ 0.93
GPC1-205ENST00000427506 KAT6AQ92794 2004 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 M0QZ92 97 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 RFXAPO00287 272 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 DLL1O00548 723 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 ARHGEF15O94989 841 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 PSAPP07602 524 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 MRPS6P82932 125 aaKnown RBP20.87■□□□□ 0.93
GPC1-205ENST00000427506 MGAT3Q09327 533 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 IER5Q5VY09 327 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 SMAP1Q8IYB5 467 aaPredicted RBP20.87■□□□□ 0.93
GPC1-205ENST00000427506 FAM177A1Q8N128 213 aaPredicted RBP20.87■□□□□ 0.93
GPC1-205ENST00000427506 USP38Q8NB14 1042 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 DAGLBQ8NCG7 672 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 ATP8B4Q8TF62 1192 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 KCNJ14Q9UNX9 436 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms