RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MAFBQ9Y5Q3 323 aaPredicted RBP27.56■■■□□ 2
VEGFA-209ENST00000425836 PQBP1O60828 265 aaKnown RBP27.56■■■□□ 2
VEGFA-209ENST00000425836 TECP42680 631 aa27.56■■■□□ 2
VEGFA-209ENST00000425836 ATP2C1P98194 919 aaPredicted RBP27.56■■■□□ 2
VEGFA-209ENST00000425836 FAM47CQ5HY64 1035 aa27.56■■■□□ 2
VEGFA-209ENST00000425836 SESTD1Q86VW0 696 aa27.56■■■□□ 2
VEGFA-209ENST00000425836 C7orf31Q8N865 590 aa27.56■■■□□ 2
VEGFA-209ENST00000425836 TOX2Q96NM4 488 aa27.56■■■□□ 2
VEGFA-209ENST00000425836 FTOQ9C0B1 505 aaKnown RBP eCLIP27.56■■■□□ 25e-19■□□□□ 10.1
VEGFA-209ENST00000425836 DDIT3P35638 169 aa27.55■■■□□ 2
VEGFA-209ENST00000425836 PTPN11Q06124 597 aaPredicted RBP27.55■■■□□ 2
VEGFA-209ENST00000425836 SF3A1Q15459 793 aaKnown RBP27.55■■■□□ 2
VEGFA-209ENST00000425836 PDXDC2PQ6P474 469 aa27.55■■■□□ 2
VEGFA-209ENST00000425836 DPF3Q92784 378 aa27.55■■■□□ 2
VEGFA-209ENST00000425836 CLIC4Q9Y696 253 aa27.55■■■□□ 2
VEGFA-209ENST00000425836 ATP4AP20648 1035 aa27.54■■■□□ 2
VEGFA-209ENST00000425836 PRPHP41219 470 aa27.54■■■□□ 2
VEGFA-209ENST00000425836 SLC26A2P50443 739 aa27.54■■■□□ 2
VEGFA-209ENST00000425836 PLCB4Q15147 1175 aa27.54■■■□□ 2
VEGFA-209ENST00000425836 EPHA7Q15375 998 aa27.54■■■□□ 2
VEGFA-209ENST00000425836 FAM126BQ8IXS8 530 aa27.54■■■□□ 2
VEGFA-209ENST00000425836 DAXXQ9UER7 740 aaPredicted RBP27.54■■■□□ 2
VEGFA-209ENST00000425836 MROH7Q68CQ1 1323 aa27.54■■■□□ 2
VEGFA-209ENST00000425836 SCN10AQ9Y5Y9 1956 aa27.54■■■□□ 2
VEGFA-209ENST00000425836 SMIM10L2AP0DMW4 78 aa27.53■■■□□ 2
VEGFA-209ENST00000425836 SMIM10L2BP0DMW5 78 aa27.53■■■□□ 2
VEGFA-209ENST00000425836 IL17AQ16552 155 aa27.53■■■□□ 2
VEGFA-209ENST00000425836 TRPV6Q9H1D0 765 aa27.53■■■□□ 2
VEGFA-209ENST00000425836 GTF2IRD1Q9UHL9 959 aa27.53■■■□□ 2
VEGFA-209ENST00000425836 IGSF9BQ9UPX0 1349 aa27.53■■■□□ 2
VEGFA-209ENST00000425836 POTEMA6NI47 508 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 BMP15O95972 392 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 FXR2P51116 673 aaKnown RBP eCLIP27.52■■■□□ 26e-18■■■□□ 18.2
VEGFA-209ENST00000425836 MLLT1Q03111 559 aaPredicted RBP27.52■■■□□ 2
VEGFA-209ENST00000425836 HIC1Q14526 733 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 UGCGQ16739 394 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 USP28Q96RU2 1077 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 TRMT13Q9NUP7 481 aaKnown RBP27.52■■■□□ 2
VEGFA-209ENST00000425836 CEP131Q9UPN4 1083 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 DNAH12Q6ZR08 3092 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 DCDC2CA8MYV0 355 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 ZNF862O60290 1169 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 EVI5O60447 810 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 B4GALT4O60513 344 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 CD4P01730 458 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 TMEM266Q2M3C6 531 aa27.52■■■□□ 2
VEGFA-209ENST00000425836 GDF6Q6KF10 455 aaPredicted RBP27.52■■■□□ 2
VEGFA-209ENST00000425836 HOXC8P31273 242 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 CEBPZQ03701 1054 aaKnown RBP27.51■■□□□ 1.99
VEGFA-209ENST00000425836 FAAP100Q0VG06 881 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 PTPAQ15257 358 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 ARL6IP4Q66PJ3 421 aaKnown RBP27.51■■□□□ 1.99
VEGFA-209ENST00000425836 DTHD1Q6ZMT9 781 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 C7orf61Q8IZ16 206 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 BANK1Q8NDB2 785 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 ATP8B4Q8TF62 1192 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 SETD4Q9NVD3 440 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 RGL1Q9NZL6 768 aa27.51■■□□□ 1.99
VEGFA-209ENST00000425836 POTEB3A0JP26 581 aa27.5■■□□□ 1.99
VEGFA-209ENST00000425836 P4HBP07237 508 aaKnown RBP27.5■■□□□ 1.99
VEGFA-209ENST00000425836 FOXD4L6Q3SYB3 417 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-209ENST00000425836 POTEBQ6S5H4 581 aa27.5■■□□□ 1.99
VEGFA-209ENST00000425836 FOXD4L3Q6VB84 417 aaPredicted RBP27.5■■□□□ 1.99
VEGFA-209ENST00000425836 CKAP2LQ8IYA6 745 aa27.5■■□□□ 1.99
VEGFA-209ENST00000425836 ATP6V0A1Q93050 837 aa27.5■■□□□ 1.99
VEGFA-209ENST00000425836 DYDC2Q96IM9 177 aa27.5■■□□□ 1.99
VEGFA-209ENST00000425836 EIF2AK1Q9BQI3 630 aaKnown RBP27.5■■□□□ 1.99
VEGFA-209ENST00000425836 TRPC6Q9Y210 931 aa27.5■■□□□ 1.99
VEGFA-209ENST00000425836 C17orf102A2RUQ5 167 aa27.49■■□□□ 1.99
VEGFA-209ENST00000425836 TLR3O15455 904 aaKnown RBP27.49■■□□□ 1.99
VEGFA-209ENST00000425836 PSMC5P62195 406 aa27.49■■□□□ 1.99
VEGFA-209ENST00000425836 ZNF200P98182 395 aaPredicted RBP27.49■■□□□ 1.99
VEGFA-209ENST00000425836 PDIA5Q14554 519 aa27.49■■□□□ 1.99
VEGFA-209ENST00000425836 IGSF22Q8N9C0 903 aa27.49■■□□□ 1.99
VEGFA-209ENST00000425836 ZNF396Q96N95 335 aaPredicted RBP27.49■■□□□ 1.99
VEGFA-209ENST00000425836 CTAGE1Q96RT6 745 aa27.49■■□□□ 1.99
VEGFA-209ENST00000425836 HSD17B14Q9BPX1 270 aa27.49■■□□□ 1.99
VEGFA-209ENST00000425836 TFIP11Q9UBB9 837 aaKnown RBP27.49■■□□□ 1.99
VEGFA-209ENST00000425836 INSRRP14616 1297 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 QARSP47897 775 aaKnown RBP27.48■■□□□ 1.99
VEGFA-209ENST00000425836 PPFIA1Q13136 1202 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 PTGISQ16647 500 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 TRMT1LQ7Z2T5 733 aaKnown RBP27.48■■□□□ 1.99
VEGFA-209ENST00000425836 WRAP73Q9P2S5 460 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-209ENST00000425836 NRCAMQ92823 1304 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 HBP1O60381 514 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 SLITRK3O94933 977 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 CLTBP09497 229 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 NASPP49321 788 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-209ENST00000425836 ADAM17P78536 824 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 PRKCEQ02156 737 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 CYP4A11Q02928 519 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 GRIK4Q16099 956 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 LMBR1Q8WVP7 490 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 BBXQ8WY36 941 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-209ENST00000425836 TNPO1Q92973 898 aaKnown RBP27.48■■□□□ 1.99
VEGFA-209ENST00000425836 PDLIM7Q9NR12 457 aa27.48■■□□□ 1.99
VEGFA-209ENST00000425836 STBD1O95210 358 aa27.47■■□□□ 1.99
VEGFA-209ENST00000425836 OATP04181 439 aa27.47■■□□□ 1.99
VEGFA-209ENST00000425836 NUCB2P80303 420 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms