RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MED24O75448 989 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 PPP1R37O75864 691 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 KIF4AO95239 1232 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 MYZAPP0CAP1 466 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 HNRNPH1P31943 449 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 CTNNA1P35221 906 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 PSMC6P62333 389 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 ZNF543Q08ER8 600 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 SEPT2Q15019 361 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 EXOC3L4Q17RC7 722 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 NAA35Q5VZE5 725 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 GJB7Q6PEY0 223 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 PEX26Q7Z412 305 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 EPN3Q9H201 632 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 PCDHB13Q9Y5F0 798 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 SPATA31A5Q5VU36 1347 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 SPATA31A7Q8IWB4 1347 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 hCG_1984214I3L0E3 225 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 TTLL1O95922 423 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 UCHL3P15374 230 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 MDH1P40925 334 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 SNAP25P60880 206 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 PRPF4BQ13523 1007 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 IRF2BP2Q7Z5L9 587 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 ADAT2Q7Z6V5 191 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 NLRP14Q86W24 1093 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 ZNF713Q8N859 430 aaPredicted RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 ZNF473Q8WTR7 871 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 U2AF1L4Q8WU68 220 aaKnown RBP8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 GANQ9H2C0 597 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 KCTD10Q9H3F6 313 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 BCAS3Q9H6U6 928 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 AMACRQ9UHK6 382 aa8.24□□□□□ -1.09
SMARCC1-202ENST00000425518 CASZ1Q86V15 1759 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 SFI1A8K8P3 1242 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 CPP00450 1065 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 ITGA4P13612 1032 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 HSD17B3P37058 310 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 HDLBPQ00341 1268 aaKnown RBP8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 CYP4A11Q02928 519 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 PTGISQ16647 500 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 PRR16Q569H4 304 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 METTL13Q8N6R0 699 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 DPH5Q9H2P9 285 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 NAGPAQ9UK23 515 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 PCDHA2Q9Y5H9 948 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 PCDHA1Q9Y5I3 950 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 DOT1LQ8TEK3 1739 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 CNTNAP4Q9C0A0 1308 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 KDM3AQ9Y4C1 1321 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 MEFVO15553 781 aaPredicted RBP8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 DAPK3O43293 454 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 AFPP02771 609 aaKnown RBP8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 XRCC5P13010 732 aaKnown RBP8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 TMOD1P28289 359 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 USP11P51784 963 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 SF3A3Q12874 501 aaKnown RBP eCLIP8.23□□□□□ -1.092e-6■■■■□ 20.8
SMARCC1-202ENST00000425518 ARSHQ5FYA8 562 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 DAAM2Q86T65 1068 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 SFR1Q86XK3 245 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 DHX36Q9H2U1 1008 aaKnown RBP8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 DAGLAQ9Y4D2 1042 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 HMGB1P1B2RPK0 211 aaPredicted RBP8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 ZBTB5O15062 677 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 H2AFZP0C0S5 128 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 MYBP10242 640 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 FLT3P36888 993 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 CASP4P49662 377 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 SCNN1DP51172 638 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 IFI16Q16666 785 aaKnown RBP8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 TRAPPC3LQ5T215 181 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 MICALCLQ6ZW33 695 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 H2AFVQ71UI9 128 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 CELF4Q9BZC1 486 aaKnown RBP8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 ISCUQ9H1K1 167 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 DNM3Q9UQ16 869 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 ABCA3Q99758 1704 aa8.23□□□□□ -1.09
SMARCC1-202ENST00000425518 PGRMC1O00264 195 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 ATP2C2O75185 946 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 FLOT1O75955 427 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 GFPT2O94808 682 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 GUCY2CP25092 1073 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 PON1P27169 355 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 ARHGAP27Q6ZUM4 889 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 CATSPER3Q86XQ3 398 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 MREGQ8N565 214 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 MYCBPAPQ8TBZ2 947 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 LRRC45Q96CN5 670 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 PBKQ96KB5 322 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 MXD3Q9BW11 206 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 NEUROG2Q9H2A3 272 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 DDX4Q9NQI0 724 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 SEPT11Q9NVA2 429 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 SERPINB13Q9UIV8 391 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 FBXL5Q9UKA1 691 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 NOC2LQ9Y3T9 749 aaKnown RBP8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 DLEC1Q9Y238 1755 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 FAM196BA6NMK8 535 aa8.22□□□□□ -1.09
SMARCC1-202ENST00000425518 RSPH10B2B2RC85 870 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms