RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 RBL2Q08999 1139 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 PPFIBP1Q86W92 1011 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 MB21D1Q8N884 522 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 ZNF507Q8TCN5 953 aa29.4■■■□□ 2.3
LDB1-202ENST00000425280 KCNJ6P48051 423 aa29.39■■■□□ 2.3
LDB1-202ENST00000425280 LRRC55Q6ZSA7 311 aa29.39■■■□□ 2.3
LDB1-202ENST00000425280 ARMC9Q7Z3E5 817 aa29.39■■■□□ 2.3
LDB1-202ENST00000425280 KCND1Q9NSA2 647 aa29.39■■■□□ 2.3
LDB1-202ENST00000425280 LCTP09848 1927 aa29.39■■■□□ 2.3
LDB1-202ENST00000425280 USP27XA6NNY8 438 aa29.38■■■□□ 2.29
LDB1-202ENST00000425280 AKR1B15C9JRZ8 316 aaPredicted RBP29.38■■■□□ 2.29
LDB1-202ENST00000425280 PRKCSHP14314 528 aaPredicted RBP29.38■■■□□ 2.29
LDB1-202ENST00000425280 DNTTIP2Q5QJE6 756 aaKnown RBP29.38■■■□□ 2.29
LDB1-202ENST00000425280 PNMA8AQ86V59 439 aaPredicted RBP29.38■■■□□ 2.29
LDB1-202ENST00000425280 GPRASP2Q96D09 838 aa29.38■■■□□ 2.29
LDB1-202ENST00000425280 KIF20AO95235 890 aa29.38■■■□□ 2.29
LDB1-202ENST00000425280 FGFR1OPO95684 399 aaKnown RBP29.38■■■□□ 2.29
LDB1-202ENST00000425280 P4HBP07237 508 aaKnown RBP29.38■■■□□ 2.29
LDB1-202ENST00000425280 OPTNQ96CV9 577 aa29.38■■■□□ 2.29
LDB1-202ENST00000425280 INPP4AQ96PE3 977 aaPredicted RBP29.38■■■□□ 2.29
LDB1-202ENST00000425280 TBCAO75347 108 aaKnown RBP29.37■■■□□ 2.29
LDB1-202ENST00000425280 MTIF2P46199 727 aaKnown RBP29.37■■■□□ 2.29
LDB1-202ENST00000425280 CASP5P51878 434 aa29.37■■■□□ 2.29
LDB1-202ENST00000425280 IRX3P78415 501 aaPredicted RBP29.37■■■□□ 2.29
LDB1-202ENST00000425280 RIOX2Q8IUF8 465 aa29.37■■■□□ 2.29
LDB1-202ENST00000425280 NELFCDQ8IXH7 590 aa29.37■■■□□ 2.29
LDB1-202ENST00000425280 CCAR2Q8N163 923 aaKnown RBP29.37■■■□□ 2.29
LDB1-202ENST00000425280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.37■■■□□ 2.293e-9■□□□□ 11.3
LDB1-202ENST00000425280 GYPCP04921 128 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 E4F1Q66K89 784 aaPredicted RBP29.36■■■□□ 2.29
LDB1-202ENST00000425280 ASCC2Q9H1I8 757 aaPredicted RBP29.36■■■□□ 2.29
LDB1-202ENST00000425280 KCTD10Q9H3F6 313 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 BCAS3Q9H6U6 928 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 ZSWIM4Q9H7M6 989 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 POLD4Q9HCU8 107 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 SAMM50Q9Y512 469 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 COL4A3BPQ9Y5P4 624 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 LOXHD1Q8IVV2 1947 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 B4DLN1 442 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 EPM2AIP1Q7L775 607 aaPredicted RBP29.36■■■□□ 2.29
LDB1-202ENST00000425280 NLRX1Q86UT6 975 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 CPLX3Q8WVH0 158 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 BAG1Q99933 345 aaPredicted RBP29.36■■■□□ 2.29
LDB1-202ENST00000425280 AGTPBP1Q9UPW5 1226 aa29.36■■■□□ 2.29
LDB1-202ENST00000425280 PES1O00541 588 aaKnown RBP29.35■■■□□ 2.29
LDB1-202ENST00000425280 NKRFO15226 690 aaKnown RBP eCLIP29.35■■■□□ 2.292e-6■□□□□ 10.4
LDB1-202ENST00000425280 RGS20O76081 388 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 MOGSQ13724 837 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 MIIPQ5JXC2 388 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 A0A1W2PQC6 194 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 MAFGO15525 162 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 CCNE2O96020 404 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 TPM2P07951 284 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 GAP43P17677 238 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 CASP14P31944 242 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 DNM2P50570 870 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 LDLRAD1Q5T700 205 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 PANX2Q96RD6 677 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 SPATC1LQ9H0A9 340 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 KCND2Q9NZV8 630 aa29.35■■■□□ 2.29
LDB1-202ENST00000425280 MFAP3LO75121 409 aa29.34■■■□□ 2.29
LDB1-202ENST00000425280 NOC4LQ9BVI4 516 aaKnown RBP29.34■■■□□ 2.29
LDB1-202ENST00000425280 TRMT1Q9NXH9 659 aaKnown RBP29.34■■■□□ 2.29
LDB1-202ENST00000425280 FBXO40Q9UH90 709 aa29.34■■■□□ 2.29
LDB1-202ENST00000425280 KIAA1217Q5T5P2 1943 aa29.34■■■□□ 2.29
LDB1-202ENST00000425280 POTEJP0CG39 1038 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 QARSP47897 775 aaKnown RBP29.33■■■□□ 2.29
LDB1-202ENST00000425280 FXR1P51114 621 aaKnown RBP eCLIP29.33■■■□□ 2.29
LDB1-202ENST00000425280 HERVK_113P62684 666 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 FKBP3Q00688 224 aaKnown RBP29.33■■■□□ 2.29
LDB1-202ENST00000425280 KRT76Q01546 638 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 ANKRD35Q8N283 1001 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 ARHGEF35A5YM69 484 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 SFI1A8K8P3 1242 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 STX10O60499 249 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 FAM13AO94988 1023 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 MYBP10242 640 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 JAK3P52333 1124 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 TRIM14Q14142 442 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 OLFML3Q9NRN5 406 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 CLEC11AQ9Y240 323 aa29.33■■■□□ 2.29
LDB1-202ENST00000425280 TRAF5O00463 557 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 ARHGAP6O43182 974 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 CNMDO75829 334 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 STAM2O75886 525 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 LYPLA2O95372 231 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 C16orf45Q96MC5 204 aaPredicted RBP29.32■■■□□ 2.28
LDB1-202ENST00000425280 MRPL44Q9H9J2 332 aaKnown RBP29.32■■■□□ 2.28
LDB1-202ENST00000425280 PFASO15067 1338 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 WDR64B1ANS9 1081 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 SFNP31947 248 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 HOXD13P35453 343 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 GJA5P36382 358 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 CNTN2Q02246 1040 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 CNGA4Q8IV77 575 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 DNERQ8NFT8 737 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 PAGR1Q9BTK6 254 aa29.32■■■□□ 2.28
LDB1-202ENST00000425280 R3HCC1Q9Y3T6 440 aaKnown RBP29.32■■■□□ 2.28
LDB1-202ENST00000425280 TPM1P09493 284 aa29.31■■■□□ 2.28
LDB1-202ENST00000425280 KCNA2P16389 499 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms