RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 TOX2Q96NM4 488 aa24.69■■□□□ 1.54
HMGA2-205ENST00000425208 PDE4DIPQ5VU43 2346 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 DCDC2CA8MYV0 355 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 TLR3O15455 904 aaKnown RBP24.68■■□□□ 1.54
HMGA2-205ENST00000425208 F13A1P00488 732 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 TLE2Q04725 743 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 SPIRE1Q08AE8 756 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 TMEM266Q2M3C6 531 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 FOXD4L5Q5VV16 416 aaPredicted RBP24.68■■□□□ 1.54
HMGA2-205ENST00000425208 NCAPH2Q6IBW4 605 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 PDXDC2PQ6P474 469 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 SESTD1Q86VW0 696 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 FAM126BQ8IXS8 530 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 C4orf32Q8N8J7 132 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 PPP1R13LQ8WUF5 828 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 FOXD4L4Q8WXT5 416 aaPredicted RBP24.68■■□□□ 1.54
HMGA2-205ENST00000425208 GABBR1Q9UBS5 961 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 IGSF9BQ9UPX0 1349 aa24.68■■□□□ 1.54
HMGA2-205ENST00000425208 BMP15O95972 392 aa24.67■■□□□ 1.54
HMGA2-205ENST00000425208 FAM173BQ6P4H8 233 aa24.67■■□□□ 1.54
HMGA2-205ENST00000425208 HDAC6Q9UBN7 1215 aa24.67■■□□□ 1.54
HMGA2-205ENST00000425208 GTF2IRD1Q9UHL9 959 aa24.67■■□□□ 1.54
HMGA2-205ENST00000425208 CEP131Q9UPN4 1083 aa24.67■■□□□ 1.54
HMGA2-205ENST00000425208 MAFBQ9Y5Q3 323 aaPredicted RBP24.67■■□□□ 1.54
HMGA2-205ENST00000425208 EML1O00423 815 aa24.66■■□□□ 1.54
HMGA2-205ENST00000425208 SMIM10L2AP0DMW4 78 aa24.66■■□□□ 1.54
HMGA2-205ENST00000425208 SMIM10L2BP0DMW5 78 aa24.66■■□□□ 1.54
HMGA2-205ENST00000425208 ATP2C1P98194 919 aaPredicted RBP24.66■■□□□ 1.54
HMGA2-205ENST00000425208 C7orf61Q8IZ16 206 aa24.66■■□□□ 1.54
HMGA2-205ENST00000425208 TNPO1Q92973 898 aaKnown RBP24.66■■□□□ 1.54
HMGA2-205ENST00000425208 RNPEPQ9H4A4 650 aa24.66■■□□□ 1.54
HMGA2-205ENST00000425208 TRPC6Q9Y210 931 aa24.66■■□□□ 1.54
HMGA2-205ENST00000425208 PRPHP41219 470 aa24.65■■□□□ 1.54
HMGA2-205ENST00000425208 TECP42680 631 aa24.65■■□□□ 1.54
HMGA2-205ENST00000425208 CKAP2LQ8IYA6 745 aa24.65■■□□□ 1.54
HMGA2-205ENST00000425208 ATP6V0A1Q93050 837 aa24.65■■□□□ 1.54
HMGA2-205ENST00000425208 POTEMA6NI47 508 aa24.64■■□□□ 1.54
HMGA2-205ENST00000425208 B4GALT4O60513 344 aa24.64■■□□□ 1.54
HMGA2-205ENST00000425208 CLTBP09497 229 aa24.64■■□□□ 1.54
HMGA2-205ENST00000425208 FXR2P51116 673 aaKnown RBP eCLIP24.64■■□□□ 1.54
HMGA2-205ENST00000425208 PLCB4Q15147 1175 aa24.64■■□□□ 1.54
HMGA2-205ENST00000425208 EPHA7Q15375 998 aa24.64■■□□□ 1.54
HMGA2-205ENST00000425208 SF3A1Q15459 793 aaKnown RBP24.64■■□□□ 1.54
HMGA2-205ENST00000425208 RAB34Q9BZG1 259 aa24.64■■□□□ 1.54
HMGA2-205ENST00000425208 TRMT13Q9NUP7 481 aaKnown RBP24.64■■□□□ 1.54
HMGA2-205ENST00000425208 NOD1Q9Y239 953 aa24.64■■□□□ 1.54
HMGA2-205ENST00000425208 NR2E3Q9Y5X4 410 aa24.64■■□□□ 1.54
HMGA2-205ENST00000425208 TRIP12Q14669 1992 aaPredicted RBP24.64■■□□□ 1.53
HMGA2-205ENST00000425208 NRCAMQ92823 1304 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 POTEB3A0JP26 581 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 C17orf102A2RUQ5 167 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 BRD1O95696 1058 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 CD4P01730 458 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 GNAT1P11488 350 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 PPFIA1Q13136 1202 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 ARL6IP4Q66PJ3 421 aaKnown RBP24.63■■□□□ 1.53
HMGA2-205ENST00000425208 GDF6Q6KF10 455 aaPredicted RBP24.63■■□□□ 1.53
HMGA2-205ENST00000425208 POTEBQ6S5H4 581 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 DTHD1Q6ZMT9 781 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 ATP8B4Q8TF62 1192 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 FAM167AQ96KS9 214 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 TRPV6Q9H1D0 765 aa24.63■■□□□ 1.53
HMGA2-205ENST00000425208 P4HBP07237 508 aaKnown RBP24.62■■□□□ 1.53
HMGA2-205ENST00000425208 PSMC5P62195 406 aa24.62■■□□□ 1.53
HMGA2-205ENST00000425208 FAAP100Q0VG06 881 aa24.62■■□□□ 1.53
HMGA2-205ENST00000425208 PTGISQ16647 500 aa24.62■■□□□ 1.53
HMGA2-205ENST00000425208 UGCGQ16739 394 aa24.62■■□□□ 1.53
HMGA2-205ENST00000425208 BANK1Q8NDB2 785 aa24.62■■□□□ 1.53
HMGA2-205ENST00000425208 FTOQ9C0B1 505 aaKnown RBP eCLIP24.62■■□□□ 1.53
HMGA2-205ENST00000425208 PRDM5Q9NQX1 630 aaPredicted RBP24.62■■□□□ 1.53
HMGA2-205ENST00000425208 PRKAG2Q9UGJ0 569 aa24.62■■□□□ 1.53
HMGA2-205ENST00000425208 HBP1O60381 514 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 DKC1O60832 514 aaKnown RBP eCLIP24.61■■□□□ 1.53
HMGA2-205ENST00000425208 ATP4AP20648 1035 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 HOXC8P31273 242 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 QARSP47897 775 aaKnown RBP24.61■■□□□ 1.53
HMGA2-205ENST00000425208 PRKCEQ02156 737 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 ERMNQ8TAM6 284 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 NEK9Q8TD19 979 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 LMBR1Q8WVP7 490 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 BBXQ8WY36 941 aaPredicted RBP24.61■■□□□ 1.53
HMGA2-205ENST00000425208 ZNF396Q96N95 335 aaPredicted RBP24.61■■□□□ 1.53
HMGA2-205ENST00000425208 EIF2AK1Q9BQI3 630 aaKnown RBP24.61■■□□□ 1.53
HMGA2-205ENST00000425208 LXNQ9BS40 222 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 PDLIM7Q9NR12 457 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 SETD4Q9NVD3 440 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 CLIC4Q9Y696 253 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 ZNF862O60290 1169 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 OATP04181 439 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 CEBPZQ03701 1054 aaKnown RBP24.61■■□□□ 1.53
HMGA2-205ENST00000425208 GRIK4Q16099 956 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 USP28Q96RU2 1077 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 TSHZ2Q9NRE2 1034 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 TMEM39AQ9NV64 488 aa24.61■■□□□ 1.53
HMGA2-205ENST00000425208 TNRC18O15417 2968 aaPredicted RBP24.6■■□□□ 1.53
HMGA2-205ENST00000425208 RRN3P2A6NIE6 340 aa24.6■■□□□ 1.53
HMGA2-205ENST00000425208 INSRRP14616 1297 aa24.6■■□□□ 1.53
HMGA2-205ENST00000425208 CYP4A11Q02928 519 aa24.6■■□□□ 1.53
HMGA2-205ENST00000425208 PDIA5Q14554 519 aa24.6■■□□□ 1.53
HMGA2-205ENST00000425208 HAUS3Q68CZ6 603 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms