RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PLEKHN1Q494U1 663 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 MINDY4Q4G0A6 757 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 PPP4R3AQ6IN85 833 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 RPTNQ6XPR3 784 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 SPATC1Q76KD6 591 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 WDR66Q8TBY9 1149 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 PANK1Q8TE04 598 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 IPO4Q8TEX9 1081 aaKnown RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 MZB1Q8WU39 189 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 JPH3Q8WXH2 748 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 DACT3Q96B18 629 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 YIPF4Q9BSR8 244 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 LRRC27Q9C0I9 530 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 PUS7LQ9H0K6 701 aaKnown RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 NOL6Q9H6R4 1146 aaKnown RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 FEZ2Q9UHY8 353 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 ZNF214Q9UL59 606 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 NAP1L2Q9ULW6 460 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 ZNF451Q9Y4E5 1061 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 SLC12A7Q9Y666 1083 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 MORC2Q9Y6X9 1032 aaPredicted RBP4.45□□□□□ -1.7
SF3B1-205ENST00000424674 NCANO14594 1321 aa4.45□□□□□ -1.7
SF3B1-205ENST00000424674 PHLDB1Q86UU1 1377 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 FAM170AA1A519 330 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 B8ZZF3 427 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 ORC4O43929 436 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 BRINP1O60477 761 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 TRIM13O60858 407 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 DDAH1O94760 285 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 MSL3P1P0C860 447 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 ZSCAN20P17040 1043 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 EIF5P55010 431 aaKnown RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 POU4F1Q01851 419 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 MVKQ03426 396 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 CHAF1AQ13111 956 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 STK3Q13188 491 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 TBX2Q13207 712 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 CBX2Q14781 532 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 NR1I3Q14994 352 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 GNPTABQ3T906 1256 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 FNDC3BQ53EP0 1204 aaKnown RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 DACT2Q5SW24 774 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 C1QTNF12Q5T7M4 302 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 MZT2AQ6P582 158 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 CNKSR3Q6P9H4 555 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 RASSF3Q86WH2 238 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 LDHDQ86WU2 507 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 SPATS2Q86XZ4 545 aaKnown RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 FTSJ3Q8IY81 847 aaKnown RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 AHI1Q8N157 1196 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 PPM1KQ8N3J5 372 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 MSL3Q8N5Y2 521 aaKnown RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 VPS37AQ8NEZ2 397 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 ADCY4Q8NFM4 1077 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 TBATAQ96M53 351 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 FGD4Q96M96 766 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 ZDHHC15Q96MV8 337 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 KCNC2Q96PR1 638 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 RHOBTB2Q9BYZ6 727 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.44□□□□□ -1.72e-6■■□□□ 11.5
SF3B1-205ENST00000424674 ALDH8A1Q9H2A2 487 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 EPB41L4AQ9HCS5 686 aaPredicted RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 INTS7Q9NVH2 962 aaKnown RBP4.44□□□□□ -1.7
SF3B1-205ENST00000424674 PCDHA5Q9Y5H7 936 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 DGKBQ9Y6T7 804 aa4.44□□□□□ -1.7
SF3B1-205ENST00000424674 PRSS47A8MTI9 375 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 PRRG2O14669 202 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 PLD2O14939 933 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 CLGNO14967 610 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 ERC2O15083 957 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 GPR39O43194 453 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 SRGAP3O43295 1099 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 PRPF3O43395 683 aaKnown RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 PIP5K1CO60331 668 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 NBNO60934 754 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 DBHP09172 617 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 FAM200BP0CF97 657 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 SLC5A1P13866 664 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 IFNGR1P15260 489 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 MAPKAPK2P49137 400 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 CORO7P57737 925 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 GPSM2P81274 684 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 NUCB1Q02818 461 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 GBX1Q14549 363 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 PPP2R5DQ14738 602 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 TOMM20Q15388 145 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 TSHZ3Q63HK5 1081 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 MZT2BQ6NZ67 158 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 C1orf228Q6PIY5 440 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 ZC3H14Q6PJT7 736 aaKnown RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 FAM129CQ86XR2 697 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 IGDCC3Q8IVU1 814 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 TMEFF1Q8IYR6 380 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 LRRC47Q8N1G4 583 aaKnown RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 C19orf47Q8N9M1 422 aaKnown RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 MARCH10Q8NA82 808 aaPredicted RBP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 ZNF622Q969S3 477 aaKnown RBP eCLIP4.43□□□□□ -1.7
SF3B1-205ENST00000424674 TIFAQ96CG3 184 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 TNIP3Q96KP6 325 aa4.43□□□□□ -1.7
SF3B1-205ENST00000424674 PTCHD1Q96NR3 888 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms