RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ZBED2Q9BTP6 218 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 ZMYND12Q9H0C1 365 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 SMARCAD1Q9H4L7 1026 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 ZSWIM6Q9HCJ5 1215 aa17.32■□□□□ 0.36
USB1-202ENST00000423271 FAM86B1E9PN63 330 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 EFCAB14O75071 495 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 SEC24BO95487 1268 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 FAM86B2P0C5J1 330 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 EVCP57679 992 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 ACTR2P61160 394 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 MICALL1Q8N3F8 863 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 CRYGNQ8WXF5 182 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 ARNTL2Q8WYA1 636 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 UIMC1Q96RL1 719 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
USB1-202ENST00000423271 SLC26A6Q9BXS9 759 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 UPF3BQ9BZI7 483 aaKnown RBP17.31■□□□□ 0.36
USB1-202ENST00000423271 TUBE1Q9UJT0 475 aa17.31■□□□□ 0.36
USB1-202ENST00000423271 COL4A4P53420 1690 aaPredicted RBP17.31■□□□□ 0.36
USB1-202ENST00000423271 IGLV3-22A0A075B6J6 115 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 DDX39AO00148 427 aaKnown RBP17.3■□□□□ 0.36
USB1-202ENST00000423271 CCNE2O96020 404 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 IFNAR1P17181 557 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 ZNF76P36508 570 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 IGBP1P78318 339 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 FAM26DQ5JW98 314 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 MARCH8Q5T0T0 291 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 PLA2G4DQ86XP0 818 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 REXO1Q8N1G1 1221 aaKnown RBP17.3■□□□□ 0.36
USB1-202ENST00000423271 SEPT8Q92599 483 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 RNF26Q9BY78 433 aaPredicted RBP17.3■□□□□ 0.36
USB1-202ENST00000423271 C6orf50Q9HD87 102 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 CYP46A1Q9Y6A2 500 aa17.3■□□□□ 0.36
USB1-202ENST00000423271 MBLAC1A4D2B0 266 aaPredicted RBP17.29■□□□□ 0.36
USB1-202ENST00000423271 CHRNA1P02708 482 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 INSRRP14616 1297 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 AKAP17AQ02040 695 aaKnown RBP17.29■□□□□ 0.36
USB1-202ENST00000423271 PLCB4Q15147 1175 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 KRT40Q6A162 431 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 TAF2Q6P1X5 1199 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 NIPA1Q7RTP0 329 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 MYOCDQ8IZQ8 938 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 CCDC12Q8WUD4 166 aaPredicted RBP17.29■□□□□ 0.36
USB1-202ENST00000423271 RAD9AQ99638 391 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 AZI2Q9H6S1 392 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 VPS54Q9P1Q0 977 aa17.29■□□□□ 0.36
USB1-202ENST00000423271 AMHP03971 560 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 CYP3A4P08684 503 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 GHRP10912 638 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 MGAT3Q09327 533 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 RPAINQ86UA6 219 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 TRAPPC12Q8WVT3 735 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 DNAJB3Q8WWF6 145 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 MTUS1Q9ULD2 1270 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 TRPC6Q9Y210 931 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 MTCH2Q9Y6C9 303 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 XIRP2A4UGR9 3374 aa17.28■□□□□ 0.36
USB1-202ENST00000423271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.27■□□□□ 0.36
USB1-202ENST00000423271 LINC01553A4QN01 128 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 DHX15O43143 795 aaKnown RBP17.27■□□□□ 0.36
USB1-202ENST00000423271 ATG7O95352 703 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 GNA11P29992 359 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 STAT5BP51692 787 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 GRB10Q13322 594 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 PLPPR4Q7Z2D5 763 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 CCDC148Q8NFR7 591 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 GDPD5Q8WTR4 605 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 IFIH1Q9BYX4 1025 aaKnown RBP17.27■□□□□ 0.36
USB1-202ENST00000423271 TM6SF1Q9BZW5 370 aa17.27■□□□□ 0.36
USB1-202ENST00000423271 FAM49AQ9H0Q0 323 aaPredicted RBP17.27■□□□□ 0.36
USB1-202ENST00000423271 IGKV6D-21A0A0A0MT36 114 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 RRN3P2A6NIE6 340 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 IPO5O00410 1097 aaKnown RBP17.26■□□□□ 0.35
USB1-202ENST00000423271 LPXNO60711 386 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 EIF5BO60841 1220 aaKnown RBP17.26■□□□□ 0.35
USB1-202ENST00000423271 STK3Q13188 491 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 LPIN1Q14693 890 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 ABHD15Q6UXT9 468 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 CCDC60Q8IWA6 550 aaPredicted RBP17.26■□□□□ 0.35
USB1-202ENST00000423271 THEGQ9P2T0 379 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 CDY2AQ9Y6F7 541 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 MUC3AQ02505 3323 aa17.26■□□□□ 0.35
USB1-202ENST00000423271 POTEB3A0JP26 581 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 BACH1O14867 736 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 GTPBP6O43824 516 aaPredicted RBP17.25■□□□□ 0.35
USB1-202ENST00000423271 EDIL3O43854 480 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 POU3F3P20264 500 aaPredicted RBP17.25■□□□□ 0.35
USB1-202ENST00000423271 MRPS6P82932 125 aaKnown RBP17.25■□□□□ 0.35
USB1-202ENST00000423271 HTRA4P83105 476 aaPredicted RBP17.25■□□□□ 0.35
USB1-202ENST00000423271 SETQ01105 290 aaPredicted RBP17.25■□□□□ 0.35
USB1-202ENST00000423271 PRR16Q569H4 304 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 MCTP2Q6DN12 878 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 POTEBQ6S5H4 581 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 RSPH3Q86UC2 560 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 BICD2Q8TD16 824 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 APBB2Q92870 758 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 LENG9Q96B70 501 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 ZNF274Q96GC6 653 aaPredicted RBP17.25■□□□□ 0.35
USB1-202ENST00000423271 ZNF577Q9BSK1 485 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms