RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 Q9H521 79 aa18.92■□□□□ 0.62
TRAPPC10-203ENST00000422875 G3BP2Q9UN86 482 aaKnown RBP18.92■□□□□ 0.62
TRAPPC10-203ENST00000422875 ASPHQ12797 758 aa18.92■□□□□ 0.62
TRAPPC10-203ENST00000422875 HEMGNQ9BXL5 484 aa18.92■□□□□ 0.62
TRAPPC10-203ENST00000422875 SCOCQ9UIL1 159 aa18.92■□□□□ 0.62
TRAPPC10-203ENST00000422875 RWDD2BP57060 319 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 RNASELQ05823 741 aaKnown RBP18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 SEPT2Q15019 361 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 HOOK2Q96ED9 719 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 CYTH2Q99418 400 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 FAF1Q9UNN5 650 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 ESRRAP11474 423 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 SKIP12755 728 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 TC2NQ8N9U0 490 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 GPR101Q96P66 508 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 FBXO2Q9UK22 296 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 CAPN9O14815 690 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 MYO1EQ12965 1108 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 HPS3Q969F9 1004 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 PPP2R2AP63151 447 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 LRRC14Q15048 493 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 TMC4Q7Z404 712 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 CDKL2Q92772 493 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 VCX3AQ9NNX9 186 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 KMT5AQ9NQR1 393 aa18.91■□□□□ 0.62
TRAPPC10-203ENST00000422875 GABPAQ06546 454 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 TMEM47Q9BQJ4 181 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 LEMD3Q9Y2U8 911 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 A0A0G2JND7 137 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 GSG1L2A8MUP6 293 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 PFDN1O60925 122 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 HIPK4Q8NE63 616 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 KCNV2Q8TDN2 545 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 WDR11Q9BZH6 1224 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 GPC4O75487 556 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 GSTA1P08263 222 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 GSTA2P09210 222 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 ALDH1B1P30837 517 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 MMEL1Q495T6 779 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 BRDTQ58F21 947 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 SFR1Q86XK3 245 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 MAP7D3Q8IWC1 876 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 BRIP1Q9BX63 1249 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 ANO3Q9BYT9 981 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 LIMA1Q9UHB6 759 aaKnown RBP18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 SEPT9Q9UHD8 586 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 MAGED2Q9UNF1 606 aaPredicted RBP18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 A0A1B0GTH6 734 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 FBXW10Q5XX13 1052 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 MAML1Q92585 1016 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 ATP6V1G3Q96LB4 118 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 CSRNP1Q96S65 589 aa18.9■□□□□ 0.62
TRAPPC10-203ENST00000422875 CLRN2A0PK11 232 aa18.89■□□□□ 0.62
TRAPPC10-203ENST00000422875 CD58P19256 250 aa18.89■□□□□ 0.62
TRAPPC10-203ENST00000422875 MX2P20592 715 aa18.89■□□□□ 0.62
TRAPPC10-203ENST00000422875 DNAJC24Q6P3W2 148 aa18.89■□□□□ 0.62
TRAPPC10-203ENST00000422875 SGMS1Q86VZ5 419 aa18.89■□□□□ 0.62
TRAPPC10-203ENST00000422875 RHOT2Q8IXI1 618 aa18.89■□□□□ 0.62
TRAPPC10-203ENST00000422875 NOA1Q8NC60 698 aaKnown RBP18.89■□□□□ 0.62
TRAPPC10-203ENST00000422875 ZWINTO95229 277 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 KCNJ6P48051 423 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 CEP170P1Q96L14 293 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 TAF1DQ9H5J8 278 aaPredicted RBP18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 NXF1Q9UBU9 619 aaKnown RBP18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 PNPLA6Q8IY17 1366 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 H0YCG3 227 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 TRPA1O75762 1119 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 TRIM11Q96F44 468 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 FAM167BQ9BTA0 163 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 AMACRQ9UHK6 382 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 FBXL5Q9UKA1 691 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 AXIN2Q9Y2T1 843 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 TRPM1Q7Z4N2 1603 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L15C9J2P7 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 RASA4BC9J798 803 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L13C9JLJ4 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L11C9JVI0 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L18D6R9N7 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L22D6RA61 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L17D6RBQ6 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L19D6RCP7 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L20D6RJB6 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 RASA4O43374 803 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L24Q0WX57 530 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 USP17L6PQ6QN14 398 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 PPWD1Q96BP3 646 aaKnown RBP18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 PAGR1Q9BTK6 254 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 WDR19Q8NEZ3 1342 aa18.89■□□□□ 0.61
TRAPPC10-203ENST00000422875 TOM1L1O75674 476 aa18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 ZNF746Q6NUN9 644 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 PPP4R3CPQ6ZMV5 832 aa18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 NYAP1Q6ZVC0 841 aa18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 MRPL47Q9HD33 250 aaKnown RBP18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 GINM1Q9NU53 330 aa18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 TMEM260Q9NX78 707 aa18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 IVNS1ABPQ9Y6Y0 642 aa18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 PODXLO00592 558 aa18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 MAPK13O15264 365 aa18.88■□□□□ 0.61
TRAPPC10-203ENST00000422875 BMP3P12645 472 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms