RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 MRVI1Q9Y6F6 885 aa8.79□□□□□ -1
HLA-DQA1-204ENST00000422863 EVPLQ92817 2033 aa8.79□□□□□ -1
HLA-DQA1-204ENST00000422863 C17orf102A2RUQ5 167 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 C5orf67F2Z3F1 127 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 SMAPO00193 183 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 PER2O15055 1255 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 PPFIA3O75145 1194 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 HMMRO75330 724 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 GOLGA8HP0CJ92 632 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 MYCLP12524 364 aaPredicted RBP8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 SP2Q02086 613 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 LAMC2Q13753 1193 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 BTG3Q14201 252 aaPredicted RBP8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 CBX2Q14781 532 aaPredicted RBP8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 HSDL1Q3SXM5 330 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 ARHGEF16Q5VV41 709 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 ERMP1Q7Z2K6 904 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 FRMD5Q7Z6J6 570 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 ZBTB33Q86T24 672 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 SYTL5Q8TDW5 730 aaPredicted RBP8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 NSUN6Q8TEA1 469 aaKnown RBP8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 RMDN3Q96TC7 470 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 APOL5Q9BWW9 433 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 RNPEPQ9H4A4 650 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 PLAGL2Q9UPG8 496 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 EP300Q09472 2414 aaPredicted RBP8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 GVINP1Q7Z2Y8 2422 aa8.78□□□□□ -1
HLA-DQA1-204ENST00000422863 MED19A0JLT2 244 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 RNF223E7ERA6 249 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 PROB1E7EW31 1015 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 GDF9O60383 454 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 GGPS1O95749 300 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 GLP2RO95838 553 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 MMP1P03956 469 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ITGB1P05556 798 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 SMIM10L2AP0DMW4 78 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 SMIM10L2BP0DMW5 78 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 PDHBP11177 359 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 IBSPP21815 317 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 PAN2Q504Q3 1202 aaKnown RBP8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 MYSM1Q5VVJ2 828 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ADSSL1Q8N142 457 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 EFHBQ8N7U6 833 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 SMRP1Q8NCR6 262 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 PPTC7Q8NI37 304 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 SPPL3Q8TCT6 385 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 POF1BQ8WVV4 589 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 GPKOWQ92917 476 aaPredicted RBP eCLIP8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 RIPOR3Q96MK2 946 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 SPATA33Q96N06 139 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 C16orf70Q9BSU1 422 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 PHF7Q9BWX1 381 aaPredicted RBP8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 LRRCC1Q9C099 1032 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 SMOC2Q9H3U7 446 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 VAT1LQ9HCJ6 419 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ECHDC1Q9NTX5 307 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 SETD4Q9NVD3 440 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 CACNA1GO43497 2377 aa8.77□□□□□ -1.01
HLA-DQA1-204ENST00000422863 H3BRB1 525 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ENPP3O14638 875 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 PPFIA4O75335 1185 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 EIF3JO75822 258 aaKnown RBP8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ZFYP08048 801 aaPredicted RBP8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 NR3C2P08235 984 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ARP10275 920 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 TOP1P11387 765 aaKnown RBP8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 COPS2P61201 443 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ZNF543Q08ER8 600 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 COASYQ13057 564 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 TMEM105Q8N8V8 129 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 KLHL23Q8NBE8 558 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 CLP1Q92989 425 aaKnown RBP8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 TUT1Q9H6E5 874 aaKnown RBP8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 TLE6Q9H808 572 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 CDH22Q9UJ99 828 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 MRPL42Q9Y6G3 142 aaKnown RBP8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 KMT2BQ9UMN6 2715 aaPredicted RBP8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ADGRA3Q8IWK6 1321 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 WDR19Q8NEZ3 1342 aa8.76□□□□□ -1.01
HLA-DQA1-204ENST00000422863 FOXP2O15409 715 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 CFBP00751 764 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 CHRNA1P02708 482 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 GHRP10912 638 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ICAM3P32942 547 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 NBL1P41271 181 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 NOVP48745 357 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 GATMP50440 423 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ARHGAP4P98171 946 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 PTPN21Q16825 1174 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 CELF3Q5SZQ8 465 aaKnown RBP8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 VPS53Q5VIR6 699 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 RGS22Q8NE09 1264 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 VN1R2Q8NFZ6 395 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 MICAL1Q8TDZ2 1067 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 APBB2Q92870 758 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 NKD2Q969F2 451 aaPredicted RBP8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 PPP2R3CQ969Q6 453 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 ZNF689Q96CS4 500 aaPredicted RBP8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 IWS1Q96ST2 819 aa8.75□□□□□ -1.01
HLA-DQA1-204ENST00000422863 MLXIPQ9HAP2 919 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms