RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 KLHL7Q8IXQ5 586 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 NUCKS1Q9H1E3 243 aaKnown RBP17.35■□□□□ 0.37
CDH1-202ENST00000422392 DHX36Q9H2U1 1008 aaKnown RBP17.35■□□□□ 0.37
CDH1-202ENST00000422392 USP21Q9UK80 565 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 PCDHGC5Q9Y5F6 944 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 UBR3Q6ZT12 1888 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 MEIS2O14770 477 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 CETN3O15182 167 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 MYBP10242 640 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 HOXD13P35453 343 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 CYP4A11Q02928 519 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 DCAF17Q5H9S7 520 aaPredicted RBP17.35■□□□□ 0.37
CDH1-202ENST00000422392 FOXR2Q6PJQ5 311 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 ZNF571Q7Z3V5 609 aaPredicted RBP17.35■□□□□ 0.37
CDH1-202ENST00000422392 CAVIN3Q969G5 261 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 IKZF4Q9H2S9 585 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 SWAP70Q9UH65 585 aa17.35■□□□□ 0.37
CDH1-202ENST00000422392 GRIN2DO15399 1336 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 GNA14O95837 355 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 EEF2P13639 858 aaKnown RBP17.34■□□□□ 0.37
CDH1-202ENST00000422392 ATP1A2P50993 1020 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 PPARDQ03181 441 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 KCNA1Q09470 495 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 PPFIA1Q13136 1202 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 IFT20Q8IY31 132 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 CASKIN2Q8WXE0 1202 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 INPP4AQ96PE3 977 aaPredicted RBP17.34■□□□□ 0.37
CDH1-202ENST00000422392 REEP2Q9BRK0 252 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 GDF3Q9NR23 364 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 KCNQ5Q9NR82 932 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 AIPL1Q9NZN9 384 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 TSKSQ9UJT2 592 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 GREB1LQ9C091 1923 aaPredicted RBP17.34■□□□□ 0.37
CDH1-202ENST00000422392 LTBP1Q14766 1721 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 GOLGA8KD6RF30 607 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
CDH1-202ENST00000422392 SLC20A2Q08357 652 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 SPIRE1Q08AE8 756 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 GIT2Q14161 759 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 BCAS4Q8TDM0 211 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 RUBCNQ92622 972 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 SPAG5Q96R06 1193 aa17.34■□□□□ 0.37
CDH1-202ENST00000422392 AJAP1Q9UKB5 411 aaPredicted RBP17.34■□□□□ 0.37
CDH1-202ENST00000422392 KCNK3O14649 394 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 RAD51CO43502 376 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 OPA1O60313 960 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 ARHGAP4P98171 946 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 TCERG1LQ5VWI1 586 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 APOBEC3HQ6NTF7 200 aaKnown RBP17.33■□□□□ 0.36
CDH1-202ENST00000422392 IRF2BP2Q7Z5L9 587 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 CYP2W1Q8TAV3 490 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
CDH1-202ENST00000422392 LUC7LQ9NQ29 371 aaKnown RBP17.33■□□□□ 0.36
CDH1-202ENST00000422392 SRCAPQ6ZRS2 3230 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 FRMD3A2A2Y4 597 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 ZNF233A6NK53 670 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 CLIC2O15247 247 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 UCHL3P15374 230 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 NOP2P46087 812 aaKnown RBP17.33■□□□□ 0.36
CDH1-202ENST00000422392 CASP4P49662 377 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 PDCLQ13371 301 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 DPY19L2P1Q6NXN4 242 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 GJB7Q6PEY0 223 aa17.33■□□□□ 0.36
CDH1-202ENST00000422392 ZC3H12CQ9C0D7 883 aaKnown RBP17.33■□□□□ 0.36
CDH1-202ENST00000422392 ARMCX3Q9UH62 379 aaPredicted RBP17.33■□□□□ 0.36
CDH1-202ENST00000422392 SFI1A8K8P3 1242 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 FAM86B1E9PN63 330 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 HLA-DOAP06340 250 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 FAM86B2P0C5J1 330 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 SPATA31C1P0DKV0 1188 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 TNFRSF8P28908 595 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 CORO7P57737 925 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 GLE1Q53GS7 698 aaKnown RBP17.32■□□□□ 0.36
CDH1-202ENST00000422392 ETNPPLQ8TBG4 499 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 AKAP3O75969 853 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 PON1P27169 355 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 POLD1P28340 1107 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
CDH1-202ENST00000422392 USP11P51784 963 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 NNTQ13423 1086 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 EDRF1Q3B7T1 1238 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 ALS2CLQ60I27 953 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 SLFN13Q68D06 897 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 ARHGAP27Q6ZUM4 889 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 COA1Q9GZY4 146 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 SAMM50Q9Y512 469 aa17.32■□□□□ 0.36
CDH1-202ENST00000422392 LTBP4Q8N2S1 1624 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 DDTLA6NHG4 134 aaPredicted RBP17.31■□□□□ 0.36
CDH1-202ENST00000422392 EIF3HO15372 352 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDH1-202ENST00000422392 HOXA13P31271 388 aaPredicted RBP17.31■□□□□ 0.36
CDH1-202ENST00000422392 EXOC3L4Q17RC7 722 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 KNOP1Q1ED39 458 aaKnown RBP17.31■□□□□ 0.36
CDH1-202ENST00000422392 CFAP58Q5T655 872 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 ZC3H3Q8IXZ2 948 aaKnown RBP17.31■□□□□ 0.36
CDH1-202ENST00000422392 USP38Q8NB14 1042 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 PIK3R5Q8WYR1 880 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 KIF13BQ9NQT8 1826 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 SIPA1L1O43166 1804 aa17.31■□□□□ 0.36
CDH1-202ENST00000422392 AFPP02771 609 aaKnown RBP17.31■□□□□ 0.36
CDH1-202ENST00000422392 LENG9Q96B70 501 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms