RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 FAM133AQ8N9E0 248 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 SUPT20HQ8NEM7 779 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 COG1Q8WTW3 980 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 HNRNPLLQ8WVV9 542 aaKnown RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 GBP3Q9H0R5 595 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 ZNF277Q9NRM2 450 aaPredicted RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 FBXO28Q9NVF7 368 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 SMARCAL1Q9NZC9 954 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 CEP72Q9P209 647 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 ZNF70Q9UC06 446 aaPredicted RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 ARMCX3Q9UH62 379 aaPredicted RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 SALL4Q9UJQ4 1053 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 HDAC9Q9UKV0 1011 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 L1RE1Q9UN81 338 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 RABGAP1Q9Y3P9 1069 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 ANO9A1A5B4 782 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 H3BQF6 201 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 CIITAP33076 1130 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 EN1Q05925 392 aaPredicted RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 KCNA1Q09470 495 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 KNOP1Q1ED39 458 aaKnown RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 LRCH2Q5VUJ6 765 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 HGSNATQ68CP4 663 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 NFRKBQ6P4R8 1299 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 DYDC2Q96IM9 177 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 ALS2CR12Q96Q35 445 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 EDEM3Q9BZQ6 932 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 PDGFDQ9GZP0 370 aaPredicted RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 TMEM39BQ9GZU3 492 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 IKZF4Q9H2S9 585 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 PKD2L1Q9P0L9 805 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 HERC5Q9UII4 1024 aaKnown RBP6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 VAV3Q9UKW4 847 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 JRKLQ9Y4A0 524 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 PCDHB13Q9Y5F0 798 aa6.95□□□□□ -1.3
ATP2C1-203ENST00000422190 QSER1Q2KHR3 1735 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 FRMD3A2A2Y4 597 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 GCOM1H8Y6P7 765 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 MAP2K7O14733 419 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 FAM13AO94988 1023 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 POLR2MP0CAP2 368 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 SLC9A1P19634 815 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 MMP14P50281 582 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 KLHL30Q0D2K2 578 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 CASP8Q14790 479 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 EZH2Q15910 746 aaKnown RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 SLC15A2Q16348 729 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 RSBN1LQ6PCB5 846 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 FOXR2Q6PJQ5 311 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 MYCT1Q8N699 235 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 CCDC102AQ96A19 550 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 WDR18Q9BV38 432 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 GLIS2Q9BZE0 524 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 GOPCQ9HD26 462 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 EHD2Q9NZN4 543 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 ADAMTS1Q9UHI8 967 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 ZBTB21Q9ULJ3 1066 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 SNX12Q9UMY4 172 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 SMCHD1A6NHR9 2005 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 ATRNL1Q5VV63 1379 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 NRXN2Q9P2S2 1712 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 SSU72P8A0A1W2PR75 194 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 TULP1O00294 542 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 GAS7O60861 476 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 N4BP1O75113 896 aaKnown RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 PHACTR2O75167 634 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 EYA4O95677 639 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 SERPING1P05155 500 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 POLD1P28340 1107 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 NMT1P30419 496 aaKnown RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 HOXD13P35453 343 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 CASP4P49662 377 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 GPS2Q13227 327 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 EDRF1Q3B7T1 1238 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 ZNF772Q68DY9 489 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 KSR1Q8IVT5 923 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 GSPT2Q8IYD1 628 aaKnown RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 CHURC1Q8WUH1 139 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 FAM151AQ8WW52 585 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 SPAG5Q96R06 1193 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 UBXN6Q9BZV1 441 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 STK32BQ9NY57 414 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 FAM184BQ9ULE4 1060 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 TMX2Q9Y320 296 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 IGLV3-22A0A075B6J6 115 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 DDX39AO00148 427 aaKnown RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 SLC26A4O43511 780 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 CALUO43852 315 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 AKAP3O75969 853 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 TUBBP07437 444 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 XRCC5P13010 732 aaKnown RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 MYH10P35580 1976 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 ASIC2Q16515 512 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 ASTE1Q2TB18 679 aaPredicted RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 CCDC181Q5TID7 509 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 RINT1Q6NUQ1 792 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 PPP4R3CPQ6ZMV5 832 aa6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 TRMT1LQ7Z2T5 733 aaKnown RBP6.94□□□□□ -1.3
ATP2C1-203ENST00000422190 NOX5Q96PH1 765 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms