RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 OTOP2Q7RTS6 562 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 MBOAT7Q96N66 472 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 TBC1D32Q96NH3 1257 aa29.91■■■□□ 2.38
CDK9-202ENST00000421939 LLPHQ9BRT6 129 aaKnown RBP29.91■■■□□ 2.38
CDK9-202ENST00000421939 IGKV6D-21A0A0A0MT36 114 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 BACH1O14867 736 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 ST18O60284 1047 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 PARNO95453 639 aaKnown RBP29.9■■■□□ 2.38
CDK9-202ENST00000421939 THPOP40225 353 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 FOSBP53539 338 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 TRIM29Q14134 588 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 ZNF618Q5T7W0 954 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 FAM160B1Q5W0V3 765 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 TRAF7Q6Q0C0 670 aa29.9■■■□□ 2.38
CDK9-202ENST00000421939 SMAP1Q8IYB5 467 aaPredicted RBP29.9■■■□□ 2.38
CDK9-202ENST00000421939 CXXC1Q9P0U4 656 aaPredicted RBP29.9■■■□□ 2.38
CDK9-202ENST00000421939 KAT6AQ92794 2004 aa29.89■■■□□ 2.38
CDK9-202ENST00000421939 SLC26A2P50443 739 aa29.89■■■□□ 2.38
CDK9-202ENST00000421939 PLCB4Q15147 1175 aa29.89■■■□□ 2.38
CDK9-202ENST00000421939 PIK3AP1Q6ZUJ8 805 aa29.89■■■□□ 2.38
CDK9-202ENST00000421939 NEK8Q86SG6 692 aa29.89■■■□□ 2.38
CDK9-202ENST00000421939 CCDC60Q8IWA6 550 aaPredicted RBP29.89■■■□□ 2.38
CDK9-202ENST00000421939 SLC5A5Q92911 643 aa29.89■■■□□ 2.38
CDK9-202ENST00000421939 RIT2Q99578 217 aa29.89■■■□□ 2.38
CDK9-202ENST00000421939 FTOQ9C0B1 505 aaKnown RBP eCLIP29.89■■■□□ 2.38
CDK9-202ENST00000421939 TRPC6Q9Y210 931 aa29.89■■■□□ 2.38
CDK9-202ENST00000421939 GAS7O60861 476 aa29.88■■■□□ 2.37
CDK9-202ENST00000421939 MMP1P03956 469 aa29.88■■■□□ 2.37
CDK9-202ENST00000421939 NR5A1Q13285 461 aa29.88■■■□□ 2.37
CDK9-202ENST00000421939 LETM2Q2VYF4 491 aa29.88■■■□□ 2.37
CDK9-202ENST00000421939 IL27Q8NEV9 243 aa29.88■■■□□ 2.37
CDK9-202ENST00000421939 TNPO1Q92973 898 aaKnown RBP29.88■■■□□ 2.37
CDK9-202ENST00000421939 DDX25Q9UHL0 483 aaKnown RBP29.88■■■□□ 2.37
CDK9-202ENST00000421939 TUBE1Q9UJT0 475 aa29.88■■■□□ 2.37
CDK9-202ENST00000421939 GTF3C3Q9Y5Q9 886 aa29.88■■■□□ 2.37
CDK9-202ENST00000421939 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.87■■■□□ 2.37
CDK9-202ENST00000421939 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.87■■■□□ 2.37
CDK9-202ENST00000421939 CAND2O75155 1236 aa29.87■■■□□ 2.37
CDK9-202ENST00000421939 ACTN1P12814 892 aa29.87■■■□□ 2.37
CDK9-202ENST00000421939 GPNMBQ14956 572 aa29.87■■■□□ 2.37
CDK9-202ENST00000421939 LRCH2Q5VUJ6 765 aa29.87■■■□□ 2.37
CDK9-202ENST00000421939 KRT40Q6A162 431 aa29.87■■■□□ 2.37
CDK9-202ENST00000421939 FAM109BQ6ICB4 259 aaPredicted RBP29.87■■■□□ 2.37
CDK9-202ENST00000421939 TEKT3Q9BXF9 490 aa29.87■■■□□ 2.37
CDK9-202ENST00000421939 ZNF302Q9NR11 478 aa29.87■■■□□ 2.37
CDK9-202ENST00000421939 TET1Q8NFU7 2136 aa29.87■■■□□ 2.37
CDK9-202ENST00000421939 MBLAC1A4D2B0 266 aaPredicted RBP29.86■■■□□ 2.37
CDK9-202ENST00000421939 WDR64B1ANS9 1081 aa29.86■■■□□ 2.37
CDK9-202ENST00000421939 NBNO60934 754 aa29.86■■■□□ 2.37
CDK9-202ENST00000421939 INSRRP14616 1297 aa29.86■■■□□ 2.37
CDK9-202ENST00000421939 GCFC2P16383 781 aaKnown RBP29.86■■■□□ 2.37
CDK9-202ENST00000421939 HMGN5P82970 282 aaKnown RBP29.86■■■□□ 2.37
CDK9-202ENST00000421939 EARS2Q5JPH6 523 aaKnown RBP29.86■■■□□ 2.37
CDK9-202ENST00000421939 TAF2Q6P1X5 1199 aa29.86■■■□□ 2.37
CDK9-202ENST00000421939 PDXDC2PQ6P474 469 aa29.86■■■□□ 2.37
CDK9-202ENST00000421939 ETNPPLQ8TBG4 499 aa29.86■■■□□ 2.37
CDK9-202ENST00000421939 TNFRSF25Q93038 417 aa29.86■■■□□ 2.37
CDK9-202ENST00000421939 PCDHA10Q9Y5I2 948 aa29.86■■■□□ 2.37
CDK9-202ENST00000421939 POTEB3A0JP26 581 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 RRN3P2A6NIE6 340 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 ZBBXA8MT70 800 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 RSPH10B2B2RC85 870 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 SLC37A4O43826 429 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 CXCL10P02778 98 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 PSAPP07602 524 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 RSPH10BP0C881 870 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 IGBP1P78318 339 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 MBTPS1Q14703 1052 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 SWSAP1Q6NVH7 229 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 POTEBQ6S5H4 581 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 DIS3L2Q8IYB7 885 aaKnown RBP29.85■■■□□ 2.37
CDK9-202ENST00000421939 GJA10Q969M2 543 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 SAMM50Q9Y512 469 aa29.85■■■□□ 2.37
CDK9-202ENST00000421939 FAM205CA6NFA0 338 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 CTSHP09668 335 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 MARCH8Q5T0T0 291 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 PPP4R3AQ6IN85 833 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 RUFY4Q6ZNE9 571 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 Q7L0L9 218 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 DEFB123Q8N688 67 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 ATP8B4Q8TF62 1192 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 NAP1L4Q99733 375 aaKnown RBP29.84■■■□□ 2.37
CDK9-202ENST00000421939 SLC4A7Q9Y6M7 1214 aa29.84■■■□□ 2.37
CDK9-202ENST00000421939 CHMP2AO43633 222 aa29.83■■■□□ 2.37
CDK9-202ENST00000421939 PSMD10O75832 226 aa29.83■■■□□ 2.37
CDK9-202ENST00000421939 C8orf76Q96K31 380 aa29.83■■■□□ 2.37
CDK9-202ENST00000421939 UNC45AQ9H3U1 944 aa29.83■■■□□ 2.37
CDK9-202ENST00000421939 DISC1Q9NRI5 854 aa29.83■■■□□ 2.37
CDK9-202ENST00000421939 IGSF9BQ9UPX0 1349 aa29.82■■■□□ 2.36
CDK9-202ENST00000421939 BTBD18B2RXH4 712 aa29.82■■■□□ 2.36
CDK9-202ENST00000421939 CCNT1O60563 726 aaKnown RBP29.82■■■□□ 2.36
CDK9-202ENST00000421939 SFNP31947 248 aa29.82■■■□□ 2.36
CDK9-202ENST00000421939 JAK3P52333 1124 aa29.82■■■□□ 2.36
CDK9-202ENST00000421939 RPAINQ86UA6 219 aa29.82■■■□□ 2.36
CDK9-202ENST00000421939 GABBR1Q9UBS5 961 aa29.82■■■□□ 2.36
CDK9-202ENST00000421939 MAFBQ9Y5Q3 323 aaPredicted RBP29.82■■■□□ 2.36
CDK9-202ENST00000421939 GRXCR1A8MXD5 290 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 HBP1O60381 514 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 BAIAP3O94812 1187 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 DNAJB2P25686 324 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms