RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SLC6A18Q96N87 628 aa6.9□□□□□ -1.3
SFXN1-202ENST00000421887 RSRP1Q9BUV0 290 aa6.9□□□□□ -1.3
SFXN1-202ENST00000421887 RNF181Q9P0P0 153 aa6.9□□□□□ -1.3
SFXN1-202ENST00000421887 CENPJQ9HC77 1338 aaPredicted RBP6.9□□□□□ -1.3
SFXN1-202ENST00000421887 C10orf71Q711Q0 1435 aa6.9□□□□□ -1.31
SFXN1-202ENST00000421887 NFAT5O94916 1531 aa6.9□□□□□ -1.31
SFXN1-202ENST00000421887 SMARCA5O60264 1052 aaPredicted RBP6.89□□□□□ -1.31
SFXN1-202ENST00000421887 VEGFAP15692 232 aaPredicted RBP6.89□□□□□ -1.31
SFXN1-202ENST00000421887 CCNFP41002 786 aa6.89□□□□□ -1.31
SFXN1-202ENST00000421887 CTCFP49711 727 aaPredicted RBP6.89□□□□□ -1.31
SFXN1-202ENST00000421887 CYP2R1Q6VVX0 501 aa6.89□□□□□ -1.31
SFXN1-202ENST00000421887 LIMS2Q7Z4I7 341 aa6.89□□□□□ -1.31
SFXN1-202ENST00000421887 LTV1Q96GA3 475 aaPredicted RBP6.89□□□□□ -1.31
SFXN1-202ENST00000421887 PXDNLA1KZ92 1463 aa6.89□□□□□ -1.31
SFXN1-202ENST00000421887 SBF1O95248 1867 aa6.89□□□□□ -1.31
SFXN1-202ENST00000421887 BRCA1P38398 1863 aaKnown RBP6.88□□□□□ -1.31
SFXN1-202ENST00000421887 NSD2O96028 1365 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 KTN1Q86UP2 1357 aaKnown RBP6.88□□□□□ -1.31
SFXN1-202ENST00000421887 PALLDQ8WX93 1383 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 EVC2Q86UK5 1308 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 CCDC85CA6NKD9 419 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 FOXN1O15353 648 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 MMP10P09238 476 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 KIAA2012Q0VF49 1180 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.88□□□□□ -1.31
SFXN1-202ENST00000421887 LGI4Q8N135 537 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 RGS22Q8NE09 1264 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 SMARCC1Q92922 1105 aaPredicted RBP6.88□□□□□ -1.31
SFXN1-202ENST00000421887 ABHD8Q96I13 439 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 VPS11Q9H270 941 aa6.88□□□□□ -1.31
SFXN1-202ENST00000421887 H0Y8X5 98 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 FGF10O15520 208 aaPredicted RBP6.87□□□□□ -1.31
SFXN1-202ENST00000421887 ATE1O95260 518 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 DPEP1P16444 411 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 GARTP22102 1010 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 DAB2P98082 770 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 DDX11Q96FC9 970 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 FAM161BQ96MY7 647 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 PRR13Q9NZ81 148 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 TSC22D4Q9Y3Q8 395 aa6.87□□□□□ -1.31
SFXN1-202ENST00000421887 CCDC88AQ3V6T2 1871 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 AMHP03971 560 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 LBX1P52954 281 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 CORO7P57737 925 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 DALRD3Q5D0E6 543 aaKnown RBP6.86□□□□□ -1.31
SFXN1-202ENST00000421887 SMIM5Q71RC9 77 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 NPM2Q86SE8 214 aaKnown RBP6.86□□□□□ -1.31
SFXN1-202ENST00000421887 CABP7Q86V35 215 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 FAM124AQ86V42 546 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 ZNF747Q9BV97 191 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 SSBP3Q9BWW4 388 aaPredicted RBP6.86□□□□□ -1.31
SFXN1-202ENST00000421887 HS3ST3A1Q9Y663 406 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 KIAA1551Q9HCM1 1747 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 TOGARAM1Q9Y4F4 1720 aa6.86□□□□□ -1.31
SFXN1-202ENST00000421887 ITGB4P16144 1822 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 RGPD2P0DJD1 1756 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 CGNL1Q0VF96 1302 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 FAM86C2PA6NEL3 165 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 TBC1D8O95759 1140 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 GLI4P10075 376 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 L1CAMP32004 1257 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 NOP2P46087 812 aaKnown RBP6.85□□□□□ -1.31
SFXN1-202ENST00000421887 TMF1P82094 1093 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 CACNB2Q08289 660 aaPredicted RBP6.85□□□□□ -1.31
SFXN1-202ENST00000421887 FBXL19Q6PCT2 694 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 BORAQ6PGQ7 559 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 GK5Q6ZS86 529 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 CCDC144CPQ8IYA2 1237 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 C7orf61Q8IZ16 206 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 RAPGEF4Q8WZA2 1011 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 TSPAN17Q96FV3 270 aa6.85□□□□□ -1.31
SFXN1-202ENST00000421887 MON2Q7Z3U7 1717 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 MROH6A6NGR9 719 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 GLTPD2A6NH11 291 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 NME1P15531 152 aaKnown RBP6.84□□□□□ -1.31
SFXN1-202ENST00000421887 AMPHP49418 695 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 CDSNQ15517 529 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 NOL9Q5SY16 702 aaKnown RBP6.84□□□□□ -1.31
SFXN1-202ENST00000421887 MCTP2Q6DN12 878 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 IP6K1Q92551 441 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 PTCHD1Q96NR3 888 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 PCED1AQ9H1Q7 454 aa6.84□□□□□ -1.31
SFXN1-202ENST00000421887 PCDH11XQ9BZA7 1347 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 PCDH11YQ9BZA8 1340 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 NME9Q86XW9 330 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 PALM2Q8IXS6 379 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 CPA5Q8WXQ8 436 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 BRF1Q92994 677 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 EHMT1Q9H9B1 1298 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 KBTBD4Q9NVX7 518 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 NUDT5Q9UKK9 219 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 C4AP0C0L4 1744 aa6.83□□□□□ -1.32
SFXN1-202ENST00000421887 CNTNAP1P78357 1384 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 TIAM2Q8IVF5 1701 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 C9IYK1 514 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 MCM4P33991 863 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 RFC4P35249 363 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 RGS19P49795 217 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 CLCQ05315 142 aa6.82□□□□□ -1.32
SFXN1-202ENST00000421887 HDGFL2Q7Z4V5 671 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms