RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 BARHL2Q9NY43 387 aa19.85■□□□□ 0.77
MSH6-203ENST00000420813 PKD2L1Q9P0L9 805 aa19.85■□□□□ 0.77
MSH6-203ENST00000420813 SLC9A2Q9UBY0 812 aa19.85■□□□□ 0.77
MSH6-203ENST00000420813 V9GY48 417 aaPredicted RBP19.85■□□□□ 0.77
MSH6-203ENST00000420813 KLF18A0A0U1RQI7 1052 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 RRN3P2A6NIE6 340 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 GOLGA8AA7E2F4 631 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 GOLGA8BA8MQT2 603 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 STXBP3O00186 592 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 MARK3P27448 753 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 AP3B2Q13367 1082 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 TNPO1Q92973 898 aaKnown RBP19.84■□□□□ 0.77
MSH6-203ENST00000420813 SDF4Q9BRK5 362 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 ANO3Q9BYT9 981 aa19.84■□□□□ 0.77
MSH6-203ENST00000420813 WDR81Q562E7 1941 aa19.83■□□□□ 0.77
MSH6-203ENST00000420813 CEP55Q53EZ4 464 aa19.83■□□□□ 0.77
MSH6-203ENST00000420813 MARCH8Q5T0T0 291 aa19.83■□□□□ 0.77
MSH6-203ENST00000420813 PCYT2Q99447 389 aa19.83■□□□□ 0.77
MSH6-203ENST00000420813 AZI2Q9H6S1 392 aa19.83■□□□□ 0.77
MSH6-203ENST00000420813 FAM217BQ9NTX9 383 aaPredicted RBP19.83■□□□□ 0.77
MSH6-203ENST00000420813 EVPLQ92817 2033 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 SMCO2A6NFE2 343 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 UPP2O95045 317 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 GHRP10912 638 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 SREBF1P36956 1147 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 CLK2P49760 499 aaKnown RBP19.82■□□□□ 0.76
MSH6-203ENST00000420813 LPIN1Q14693 890 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 EPC2Q52LR7 807 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 PLPPR4Q7Z2D5 763 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 CYP2W1Q8TAV3 490 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 DNAJB3Q8WWF6 145 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 KCNB2Q92953 911 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 NECAB3Q96P71 396 aaPredicted RBP19.82■□□□□ 0.76
MSH6-203ENST00000420813 ATG2AQ2TAZ0 1938 aa19.82■□□□□ 0.76
MSH6-203ENST00000420813 CCDC196A0A1B0GTZ2 297 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 MEIS1O00470 390 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 ARP10275 920 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 INSRRP14616 1297 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 CDC27P30260 824 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 ACTR2P61160 394 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 PTPROQ16827 1216 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 FBXO47Q5MNV8 452 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 NIPA1Q7RTP0 329 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 MRPL38Q96DV4 380 aaKnown RBP19.81■□□□□ 0.76
MSH6-203ENST00000420813 PGBD1Q96JS3 809 aa19.81■□□□□ 0.76
MSH6-203ENST00000420813 AGO4Q9HCK5 861 aaKnown RBP19.81■□□□□ 0.76
MSH6-203ENST00000420813 H3BNC9 293 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 SLC26A2P50443 739 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 MRPS6P82932 125 aaKnown RBP19.8■□□□□ 0.76
MSH6-203ENST00000420813 FGD1P98174 961 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 ITGB3BPQ13352 177 aaPredicted RBP19.8■□□□□ 0.76
MSH6-203ENST00000420813 PFKFB3Q16875 520 aaPredicted RBP19.8■□□□□ 0.76
MSH6-203ENST00000420813 TSHZ1Q6ZSZ6 1077 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 TRPC6Q9Y210 931 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 CDY2AQ9Y6F7 541 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 SQORQ9Y6N5 450 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 MYO7AQ13402 2215 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 NID2Q14112 1375 aa19.8■□□□□ 0.76
MSH6-203ENST00000420813 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.79■□□□□ 0.76
MSH6-203ENST00000420813 ESYT2A0FGR8 921 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 ATG7O95352 703 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
MSH6-203ENST00000420813 STAT5BP51692 787 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 IGBP1P78318 339 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 PLCB4Q15147 1175 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 TIGD5Q53EQ6 642 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 IER5Q5VY09 327 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 MCTP2Q6DN12 878 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 TMEM192Q8IY95 271 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 FBXL16Q8N461 479 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 IL17RAQ96F46 866 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 UBE2ZQ9H832 354 aaPredicted RBP19.79■□□□□ 0.76
MSH6-203ENST00000420813 TMEM260Q9NX78 707 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 PCDHA2Q9Y5H9 948 aa19.79■□□□□ 0.76
MSH6-203ENST00000420813 IGKV6D-21A0A0A0MT36 114 aa19.78■□□□□ 0.76
MSH6-203ENST00000420813 SCG2P13521 617 aa19.78■□□□□ 0.76
MSH6-203ENST00000420813 HSPA4P34932 840 aa19.78■□□□□ 0.76
MSH6-203ENST00000420813 ADD1P35611 737 aaKnown RBP19.78■□□□□ 0.76
MSH6-203ENST00000420813 ZNF76P36508 570 aa19.78■□□□□ 0.76
MSH6-203ENST00000420813 GPM6BQ13491 265 aa19.78■□□□□ 0.76
MSH6-203ENST00000420813 CCDC12Q8WUD4 166 aaPredicted RBP19.78■□□□□ 0.76
MSH6-203ENST00000420813 CRYGNQ8WXF5 182 aa19.78■□□□□ 0.76
MSH6-203ENST00000420813 RC3H2Q9HBD1 1191 aaKnown RBP19.78■□□□□ 0.76
MSH6-203ENST00000420813 NAP1L2Q9ULW6 460 aaPredicted RBP19.78■□□□□ 0.76
MSH6-203ENST00000420813 KIAA1671Q9BY89 1806 aa19.78■□□□□ 0.76
MSH6-203ENST00000420813 ADGRA3Q8IWK6 1321 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 M0QZ92 97 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 ENPP3O14638 875 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 CYP3A4P08684 503 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 APOBRQ0VD83 1088 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 BLOC1S2Q6QNY1 142 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 Q6ZUG5 572 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 FIBCD1Q8N539 461 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 JAKMIP1Q96N16 626 aaKnown RBP19.77■□□□□ 0.76
MSH6-203ENST00000420813 FTHL17Q9BXU8 183 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 ZMYND12Q9H0C1 365 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 FAM49AQ9H0Q0 323 aaPredicted RBP19.77■□□□□ 0.76
MSH6-203ENST00000420813 RWDD3Q9Y3V2 267 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 TRPV2Q9Y5S1 764 aa19.77■□□□□ 0.76
MSH6-203ENST00000420813 KDM3AQ9Y4C1 1321 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms