RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 KCNH7Q9NS40 1196 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 ARHGAP20Q9P2F6 1191 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 COL4A3BPQ9Y5P4 624 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 CYP3A4P08684 503 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 HMGCS2P54868 508 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 RPS6P62753 249 aaKnown RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 TEX35Q5T0J7 233 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 ATG4CQ96DT6 458 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 WRNIP1Q96S55 665 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 TSG101Q99816 390 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 RPAP3Q9H6T3 665 aaPredicted RBP9.73□□□□□ -0.85
SNCA-206ENST00000420646 SAMM50Q9Y512 469 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 MRFAP1Q9Y605 127 aa9.73□□□□□ -0.85
SNCA-206ENST00000420646 TBX3O15119 743 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 ATP9AO75110 1047 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 ICAM1P05362 532 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 EPS15P42566 896 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 ZNF280AP59817 542 aaPredicted RBP9.72□□□□□ -0.85
SNCA-206ENST00000420646 MRPS9P82933 396 aaKnown RBP9.72□□□□□ -0.85
SNCA-206ENST00000420646 PPP2R3AQ06190 1150 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 PSMD2Q13200 908 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 TRIM14Q14142 442 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 CCDC122Q5T0U0 273 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 MYCT1Q8N699 235 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 UBXN4Q92575 508 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 ERGIC2Q96RQ1 377 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 HINFPQ9BQA5 517 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 SYT17Q9BSW7 474 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 LRRC27Q9C0I9 530 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 ZHX2Q9Y6X8 837 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 COL2A1P02458 1487 aaPredicted RBP9.72□□□□□ -0.85
SNCA-206ENST00000420646 TISP43B9A030 160 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 ZBED6P86452 979 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 SP4Q02446 784 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 MAP3K10Q02779 954 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 ITGB3BPQ13352 177 aaPredicted RBP9.72□□□□□ -0.85
SNCA-206ENST00000420646 COBLL1Q53SF7 1204 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 DCAF17Q5H9S7 520 aaPredicted RBP9.72□□□□□ -0.85
SNCA-206ENST00000420646 UTP14CQ5TAP6 766 aaKnown RBP9.72□□□□□ -0.85
SNCA-206ENST00000420646 DRC1Q96MC2 740 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 SH2D4AQ9H788 454 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 PRDM10Q9NQV6 1147 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 RNF216Q9NWF9 866 aaPredicted RBP9.72□□□□□ -0.85
SNCA-206ENST00000420646 ZNF446Q9NWS9 450 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 PCDHB13Q9Y5F0 798 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 RGPD3A6NKT7 1758 aaPredicted RBP9.72□□□□□ -0.85
SNCA-206ENST00000420646 RGPD4Q7Z3J3 1758 aa9.72□□□□□ -0.85
SNCA-206ENST00000420646 FRMD3A2A2Y4 597 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 GOLGA6L9A6NEM1 432 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 TADA3O75528 432 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 AKAP3O75969 853 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 NOL4O94818 638 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 POLR2FP61218 127 aaKnown RBP9.71□□□□□ -0.85
SNCA-206ENST00000420646 KIAA1328Q86T90 577 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 FAM160B2Q86V87 743 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 RDH13Q8NBN7 331 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 SLC5A5Q92911 643 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 LXNQ9BS40 222 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.71□□□□□ -0.85
SNCA-206ENST00000420646 SEC31AO94979 1220 aaKnown RBP9.71□□□□□ -0.85
SNCA-206ENST00000420646 PNMA6AP0CW24 399 aaPredicted RBP9.71□□□□□ -0.85
SNCA-206ENST00000420646 SLC9A1P19634 815 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 EIF4A3P38919 411 aaKnown RBP9.71□□□□□ -0.85
SNCA-206ENST00000420646 HIRAP54198 1017 aaPredicted RBP9.71□□□□□ -0.85
SNCA-206ENST00000420646 TCERG1LQ5VWI1 586 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 CACNA2D4Q7Z3S7 1137 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 CNKSR2Q8WXI2 1034 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 PSMB7Q99436 277 aa9.71□□□□□ -0.85
SNCA-206ENST00000420646 ZNHIT6Q9NWK9 470 aaKnown RBP9.71□□□□□ -0.85
SNCA-206ENST00000420646 TBCAO75347 108 aaKnown RBP9.71□□□□□ -0.86
SNCA-206ENST00000420646 EYA4O95677 639 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 ZSCAN20P17040 1043 aaPredicted RBP9.71□□□□□ -0.86
SNCA-206ENST00000420646 GFPT1Q06210 699 aaPredicted RBP9.71□□□□□ -0.86
SNCA-206ENST00000420646 MEA1Q16626 185 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 KNOP1Q1ED39 458 aaKnown RBP9.71□□□□□ -0.86
SNCA-206ENST00000420646 ARHGAP27Q6ZUM4 889 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 C1orf186Q6ZWK4 172 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 SYTL5Q8TDW5 730 aaPredicted RBP9.71□□□□□ -0.86
SNCA-206ENST00000420646 BAP1Q92560 729 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 CCDC42Q96M95 316 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 MXRA8Q9BRK3 442 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 LSM14BQ9BX40 385 aaKnown RBP9.71□□□□□ -0.86
SNCA-206ENST00000420646 SLC38A10Q9HBR0 1119 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.71□□□□□ -0.862e-6■■■■■ 149.1
SNCA-206ENST00000420646 GGA3Q9NZ52 723 aa9.71□□□□□ -0.86
SNCA-206ENST00000420646 PSME4Q14997 1843 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
SNCA-206ENST00000420646 CTNND1O60716 968 aaKnown RBP9.7□□□□□ -0.86
SNCA-206ENST00000420646 KCNH2Q12809 1159 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 SEMA3FQ13275 785 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 TNFAIP1Q13829 316 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 GJB7Q6PEY0 223 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 CAPZA3Q96KX2 299 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 POLR3CQ9BUI4 534 aaPredicted RBP9.7□□□□□ -0.86
SNCA-206ENST00000420646 KIAA1683Q9H0B3 1180 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 MLXIPQ9HAP2 919 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 CTAGE9A4FU28 777 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 FZD9O00144 591 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 ZNF185O15231 689 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms