RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 PTPN21Q16825 1174 aa23.31■■□□□ 1.32
GPC1-202ENST00000420138 FAM26FQ5R3K3 315 aa23.31■■□□□ 1.32
GPC1-202ENST00000420138 RINT1Q6NUQ1 792 aa23.31■■□□□ 1.32
GPC1-202ENST00000420138 TMC6Q7Z403 805 aa23.31■■□□□ 1.32
GPC1-202ENST00000420138 NLRX1Q86UT6 975 aa23.31■■□□□ 1.32
GPC1-202ENST00000420138 SMC1BQ8NDV3 1235 aa23.31■■□□□ 1.32
GPC1-202ENST00000420138 NACC1Q96RE7 527 aa23.31■■□□□ 1.32
GPC1-202ENST00000420138 SOWAHBA6NEL2 793 aa23.3■■□□□ 1.32
GPC1-202ENST00000420138 STAM2O75886 525 aa23.3■■□□□ 1.32
GPC1-202ENST00000420138 SLC25A27O95847 323 aa23.3■■□□□ 1.32
GPC1-202ENST00000420138 LRMPQ12912 555 aa23.3■■□□□ 1.32
GPC1-202ENST00000420138 LRRC41Q15345 812 aa23.3■■□□□ 1.32
GPC1-202ENST00000420138 C1orf186Q6ZWK4 172 aa23.3■■□□□ 1.32
GPC1-202ENST00000420138 BCAS3Q9H6U6 928 aa23.3■■□□□ 1.32
GPC1-202ENST00000420138 P4HBP07237 508 aaKnown RBP23.29■■□□□ 1.32
GPC1-202ENST00000420138 ALDH5A1P51649 535 aaPredicted RBP23.29■■□□□ 1.32
GPC1-202ENST00000420138 KRT31Q15323 416 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 TCP11X2Q5H9J9 407 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 FAM133AQ8N9E0 248 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 SPATA31C2B4DYI2 1134 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 CYP2C8P10632 490 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 EDNRBP24530 442 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 HERC4Q5GLZ8 1057 aaPredicted RBP23.29■■□□□ 1.32
GPC1-202ENST00000420138 KIAA1524Q8TCG1 905 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 TRIM47Q96LD4 638 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 SRRTQ9BXP5 876 aaKnown RBP23.29■■□□□ 1.32
GPC1-202ENST00000420138 THAP9Q9H5L6 903 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 PNMA3Q9UL41 463 aa23.29■■□□□ 1.32
GPC1-202ENST00000420138 BICDL2A1A5D9 508 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 RSPH10B2B2RC85 870 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 KCNJ18B7U540 433 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 KRT18P05783 430 aaKnown RBP23.28■■□□□ 1.32
GPC1-202ENST00000420138 RSPH10BP0C881 870 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 ZNF157P51786 506 aaPredicted RBP23.28■■□□□ 1.32
GPC1-202ENST00000420138 KRT76Q01546 638 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 KCNJ12Q14500 433 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 SAPCD2Q86UD0 394 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 LRRC8AQ8IWT6 810 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 BRI3BPQ8WY22 251 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 SENP7Q9BQF6 1050 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 SPTLC3Q9NUV7 552 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 TBC1D7Q9P0N9 293 aa23.28■■□□□ 1.32
GPC1-202ENST00000420138 POTEB2H3BUK9 544 aa23.27■■□□□ 1.32
GPC1-202ENST00000420138 TEX33O43247 280 aa23.27■■□□□ 1.32
GPC1-202ENST00000420138 LYPLA2O95372 231 aa23.27■■□□□ 1.32
GPC1-202ENST00000420138 SPAG1Q07617 926 aa23.27■■□□□ 1.32
GPC1-202ENST00000420138 CSGALNACT2Q8N6G5 542 aa23.27■■□□□ 1.32
GPC1-202ENST00000420138 FGD4Q96M96 766 aa23.27■■□□□ 1.32
GPC1-202ENST00000420138 ZSWIM4Q9H7M6 989 aa23.27■■□□□ 1.32
GPC1-202ENST00000420138 PYCARDQ9ULZ3 195 aa23.27■■□□□ 1.32
GPC1-202ENST00000420138 BTBD19C9JJ37 291 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 EIF3JO75822 258 aaKnown RBP23.26■■□□□ 1.31
GPC1-202ENST00000420138 PBX1P40424 430 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 QARSP47897 775 aaKnown RBP23.26■■□□□ 1.31
GPC1-202ENST00000420138 JAK3P52333 1124 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 STXBP2Q15833 593 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 UGCGQ16739 394 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 ZCWPW2Q504Y3 356 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 ZNF746Q6NUN9 644 aaPredicted RBP23.26■■□□□ 1.31
GPC1-202ENST00000420138 MYOCDQ8IZQ8 938 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 CTAGE1Q96RT6 745 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 SLC45A1Q9Y2W3 748 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 TELO2Q9Y4R8 837 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 NFASCO94856 1347 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 WDR64B1ANS9 1081 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 PDHXO00330 501 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 SFNP31947 248 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 ICAM3P32942 547 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 COPB2P35606 906 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 ERVK-9P63128 1117 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 ERVK-24P63145 666 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 SP2Q02086 613 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 TBX2Q13207 712 aaPredicted RBP23.26■■□□□ 1.31
GPC1-202ENST00000420138 ARMCX5Q6P1M9 558 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 FOXR2Q6PJQ5 311 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 RASAL3Q86YV0 1011 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 NOC3LQ8WTT2 800 aaKnown RBP23.26■■□□□ 1.31
GPC1-202ENST00000420138 SCFD1Q8WVM8 642 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 CDHR1Q96JP9 859 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 POLD4Q9HCU8 107 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 SAMM50Q9Y512 469 aa23.26■■□□□ 1.31
GPC1-202ENST00000420138 DNAJC25-GNG10A0A024R161 153 aa23.25■■□□□ 1.31
GPC1-202ENST00000420138 CASP5P51878 434 aa23.25■■□□□ 1.31
GPC1-202ENST00000420138 COPB1P53618 953 aaKnown RBP23.25■■□□□ 1.31
GPC1-202ENST00000420138 TERF1P54274 439 aa23.25■■□□□ 1.31
GPC1-202ENST00000420138 GSDMDP57764 484 aa23.25■■□□□ 1.31
GPC1-202ENST00000420138 ANKRD23Q86SG2 305 aa23.25■■□□□ 1.31
GPC1-202ENST00000420138 SFR1Q86XK3 245 aa23.25■■□□□ 1.31
GPC1-202ENST00000420138 EEF2KMTQ96G04 330 aa23.25■■□□□ 1.31
GPC1-202ENST00000420138 EEF1GP26641 437 aaKnown RBP23.24■■□□□ 1.31
GPC1-202ENST00000420138 GNPTABQ3T906 1256 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 RGMBQ6NW40 437 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 EPM2AIP1Q7L775 607 aaPredicted RBP23.24■■□□□ 1.31
GPC1-202ENST00000420138 RDM1Q8NG50 284 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 SMCR8Q8TEV9 937 aaPredicted RBP23.24■■□□□ 1.31
GPC1-202ENST00000420138 TAB2Q9NYJ8 693 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 KCND2Q9NZV8 630 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 DBR1Q9UK59 544 aaKnown RBP23.24■■□□□ 1.31
GPC1-202ENST00000420138 TOMM70O94826 608 aa23.24■■□□□ 1.31
GPC1-202ENST00000420138 LRRC63Q05C16 580 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms