RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 JPH1Q9HDC5 661 aaPredicted RBP16.96■□□□□ 0.31
RPS28-201ENST00000417088 KCNH7Q9NS40 1196 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 CDY2AQ9Y6F7 541 aa16.96■□□□□ 0.31
RPS28-201ENST00000417088 RRN3P2A6NIE6 340 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 LINC00271P0C7V0 271 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 MRPS6P82932 125 aaKnown RBP16.95■□□□□ 0.3
RPS28-201ENST00000417088 EXOSC10Q01780 885 aaKnown RBP16.95■□□□□ 0.3
RPS28-201ENST00000417088 FUT2Q10981 343 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 TCEAL5Q5H9L2 206 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 NEK9Q8TD19 979 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 PGBD1Q96JS3 809 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 LRFN3Q9BTN0 628 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 AGO3Q9H9G7 860 aaKnown RBP16.95■□□□□ 0.3
RPS28-201ENST00000417088 RC3H2Q9HBD1 1191 aaKnown RBP16.95■□□□□ 0.3
RPS28-201ENST00000417088 RIC8AQ9NPQ8 531 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
RPS28-201ENST00000417088 SLC9A2Q9UBY0 812 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 BRPF3Q9ULD4 1205 aa16.95■□□□□ 0.3
RPS28-201ENST00000417088 C5orf67F2Z3F1 127 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 ARP10275 920 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 IL9P15248 144 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 CTNNB1P35222 781 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 BMPR1AP36894 532 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 NAPAP54920 295 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 ACTR2P61160 394 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 BMP2KLQ5H9B9 411 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 RNF20Q5VTR2 975 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 PTCRAQ6ISU1 281 aaPredicted RBP16.94■□□□□ 0.3
RPS28-201ENST00000417088 TSHZ1Q6ZSZ6 1077 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 SKAP1Q86WV1 359 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 ZNF689Q96CS4 500 aaPredicted RBP16.94■□□□□ 0.3
RPS28-201ENST00000417088 NSUN3Q9H649 340 aaKnown RBP16.94■□□□□ 0.3
RPS28-201ENST00000417088 AZI2Q9H6S1 392 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 V9GY48 417 aaPredicted RBP16.94■□□□□ 0.3
RPS28-201ENST00000417088 NFASCO94856 1347 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 ADGRA3Q8IWK6 1321 aa16.94■□□□□ 0.3
RPS28-201ENST00000417088 TTC3P53804 2025 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 H3BQ06 376 aaPredicted RBP16.93■□□□□ 0.3
RPS28-201ENST00000417088 ZBTB43O43298 467 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 FOSP01100 380 aaPredicted RBP16.93■□□□□ 0.3
RPS28-201ENST00000417088 RB1P06400 928 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 CD52P31358 61 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 STAT5BP51692 787 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 ADCY7P51828 1080 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 COL19A1Q14993 1142 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 PLCB4Q15147 1175 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 RTN1Q16799 776 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 TMEM31Q5JXX7 168 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 PPP1R18Q6NYC8 613 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
RPS28-201ENST00000417088 PLPPR4Q7Z2D5 763 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 RTN4RL1Q86UN2 441 aaPredicted RBP16.93■□□□□ 0.3
RPS28-201ENST00000417088 TEX2Q8IWB9 1127 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 TRAPPC12Q8WVT3 735 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 LINC01599Q8WXQ3 324 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 PABPC5Q96DU9 382 aaKnown RBP16.93■□□□□ 0.3
RPS28-201ENST00000417088 SDF4Q9BRK5 362 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 ANO3Q9BYT9 981 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 FAM49AQ9H0Q0 323 aaPredicted RBP16.93■□□□□ 0.3
RPS28-201ENST00000417088 TRPC6Q9Y210 931 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 NLRC5Q86WI3 1866 aa16.93■□□□□ 0.3
RPS28-201ENST00000417088 PI4K2BG5E9Z4 385 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 STXBP3O00186 592 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 MEIS1O00470 390 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 GRM6O15303 877 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 DGKIO75912 1065 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 ATG7O95352 703 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 RPLP2P05387 115 aaKnown RBP16.92■□□□□ 0.3
RPS28-201ENST00000417088 ITGB3BPQ13352 177 aaPredicted RBP16.92■□□□□ 0.3
RPS28-201ENST00000417088 ADCK5Q3MIX3 580 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 TSGA10IPQ3SY00 556 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 CEP55Q53EZ4 464 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 IER5Q5VY09 327 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 RASEFQ8IZ41 740 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 GJD3Q8N144 294 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 TNPO1Q92973 898 aaKnown RBP16.92■□□□□ 0.3
RPS28-201ENST00000417088 CLP1Q92989 425 aaKnown RBP16.92■□□□□ 0.3
RPS28-201ENST00000417088 C11orf84Q9BUA3 381 aaPredicted RBP16.92■□□□□ 0.3
RPS28-201ENST00000417088 AGO4Q9HCK5 861 aaKnown RBP16.92■□□□□ 0.3
RPS28-201ENST00000417088 C11orf16Q9NQ32 467 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 FAM217BQ9NTX9 383 aaPredicted RBP16.92■□□□□ 0.3
RPS28-201ENST00000417088 TMEM260Q9NX78 707 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 BARHL2Q9NY43 387 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 RWDD3Q9Y3V2 267 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 PCDHA2Q9Y5H9 948 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 TRPV2Q9Y5S1 764 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 SQORQ9Y6N5 450 aa16.92■□□□□ 0.3
RPS28-201ENST00000417088 RALGAPA2Q2PPJ7 1873 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 SMCO2A6NFE2 343 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 GPR37L1O60883 481 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 CDC27P30260 824 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 SREBF1P36956 1147 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 PLA2G5P39877 138 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 CLK2P49760 499 aaKnown RBP16.91■□□□□ 0.3
RPS28-201ENST00000417088 TMEM62Q0P6H9 643 aa16.91■□□□□ 0.3
RPS28-201ENST00000417088 BTG3Q14201 252 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms