RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 C1orf146Q5VVC0 180 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 PASD1Q8IV76 773 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 KMT5AQ9NQR1 393 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 KLC4Q9NSK0 619 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 NXF1Q9UBU9 619 aaKnown RBP12.98□□□□□ -0.33
UBR4-205ENST00000417040 CCPG1Q9ULG6 757 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 ORC6Q9Y5N6 252 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 NVLO15381 856 aaKnown RBP12.98□□□□□ -0.33
UBR4-205ENST00000417040 CCNE1P24864 410 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 RAD23BP54727 409 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 FGD4Q96M96 766 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 ADAM33Q9BZ11 813 aa12.98□□□□□ -0.33
UBR4-205ENST00000417040 WDR62O43379 1518 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 ADGRL2O95490 1459 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 PHKG2P15735 406 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 PRCPP42785 496 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 FKBP3Q00688 224 aaKnown RBP12.97□□□□□ -0.33
UBR4-205ENST00000417040 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 EMBQ6PCB8 327 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 MS4A14Q96JA4 679 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 PRMT1Q99873 361 aaKnown RBP12.97□□□□□ -0.33
UBR4-205ENST00000417040 MRPL11Q9Y3B7 192 aaKnown RBP12.97□□□□□ -0.33
UBR4-205ENST00000417040 ANGPTL3Q9Y5C1 460 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 SCINQ9Y6U3 715 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 ZNF518AQ6AHZ1 1483 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 CREB3O43889 395 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 TOM1O60784 492 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 POLR2BP30876 1174 aaKnown RBP12.97□□□□□ -0.33
UBR4-205ENST00000417040 PPP2R2AP63151 447 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 UBE3CQ15386 1083 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 GRAMD4Q6IC98 578 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 OSBPL9Q96SU4 736 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 TRPV6Q9H1D0 765 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 MAGEF1Q9HAY2 307 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 TMPRSS15P98073 1019 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 PLCB4Q15147 1175 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 DNAJC24Q6P3W2 148 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 TRIM42Q8IWZ5 723 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 ACCSQ96QU6 501 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 CUEDC2Q9H467 287 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 ZDHHC9Q9Y397 364 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 LAD1O00515 517 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 EIF3BP55884 814 aaKnown RBP12.97□□□□□ -0.33
UBR4-205ENST00000417040 CHURC1Q8WUH1 139 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 HOOK2Q96ED9 719 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
UBR4-205ENST00000417040 IRX2Q9BZI1 471 aaPredicted RBP12.97□□□□□ -0.33
UBR4-205ENST00000417040 SCHIP1Q9P0W5 487 aaPredicted RBP12.97□□□□□ -0.33
UBR4-205ENST00000417040 SUFUQ9UMX1 484 aa12.97□□□□□ -0.33
UBR4-205ENST00000417040 GDF11O95390 407 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 FAM98CQ17RN3 349 aaKnown RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 SPOUT1Q5T280 376 aaKnown RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 RAB44Q7Z6P3 723 aaPredicted RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 CDC26Q8NHZ8 85 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 ALG13Q9NP73 1137 aaKnown RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 S100BP04271 92 aaPredicted RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 ALKBH5Q6P6C2 394 aaKnown RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 NUDCD3Q8IVD9 361 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 PRPF31Q8WWY3 499 aaKnown RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 DPF2Q92785 391 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 CSRNP1Q96S65 589 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 SLC38A10Q9HBR0 1119 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 PIH1D3Q9NQM4 214 aaKnown RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 DCTN3O75935 186 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 VSNL1P62760 191 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 KIF19Q2TAC6 998 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 CYB5R4Q7L1T6 521 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 SH2D3CQ8N5H7 860 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 RAPGEF5Q92565 580 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 FAF2Q96CS3 445 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 NEDD4P46934 1319 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 HOXA13P31271 388 aaPredicted RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 DLGAP5Q15398 846 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 MAP7D3Q8IWC1 876 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 TTC1Q99614 292 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 DRC3Q9H069 523 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 DDX47Q9H0S4 455 aaKnown RBP12.96□□□□□ -0.33
UBR4-205ENST00000417040 IVNS1ABPQ9Y6Y0 642 aa12.96□□□□□ -0.33
UBR4-205ENST00000417040 PDE8BO95263 885 aa12.96□□□□□ -0.34
UBR4-205ENST00000417040 SULF1Q8IWU6 871 aa12.96□□□□□ -0.34
UBR4-205ENST00000417040 C7orf31Q8N865 590 aa12.96□□□□□ -0.34
UBR4-205ENST00000417040 CEP19Q96LK0 163 aa12.96□□□□□ -0.34
UBR4-205ENST00000417040 FAM161BQ96MY7 647 aa12.96□□□□□ -0.34
UBR4-205ENST00000417040 TUBB6Q9BUF5 446 aa12.96□□□□□ -0.34
UBR4-205ENST00000417040 TLK1Q9UKI8 766 aa12.96□□□□□ -0.34
UBR4-205ENST00000417040 KDM5CP41229 1560 aa12.96□□□□□ -0.34
UBR4-205ENST00000417040 MCF2P10911 925 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 EPHB1P54762 984 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 NOP14P78316 857 aaKnown RBP12.95□□□□□ -0.34
UBR4-205ENST00000417040 SPARCL1Q14515 664 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 PDZD4Q76G19 769 aaPredicted RBP12.95□□□□□ -0.34
UBR4-205ENST00000417040 PPP1R36Q96LQ0 422 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 AK8Q96MA6 479 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 RNF14Q9UBS8 474 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 M0QZ92 97 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 SASH1O94885 1247 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 TFAMQ00059 246 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms