RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 CCDC85BQ15834 202 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-210ENST00000416778 GRIK4Q16099 956 aa20.38■□□□□ 0.85
CPNE1-210ENST00000416778 MCTP2Q6DN12 878 aa20.38■□□□□ 0.85
CPNE1-210ENST00000416778 PLPPR4Q7Z2D5 763 aa20.38■□□□□ 0.85
CPNE1-210ENST00000416778 SDF4Q9BRK5 362 aa20.38■□□□□ 0.85
CPNE1-210ENST00000416778 RNF26Q9BY78 433 aaPredicted RBP20.38■□□□□ 0.85
CPNE1-210ENST00000416778 NCOA5Q9HCD5 579 aaKnown RBP20.38■□□□□ 0.85
CPNE1-210ENST00000416778 CYP46A1Q9Y6A2 500 aa20.38■□□□□ 0.85
CPNE1-210ENST00000416778 TANC1Q9C0D5 1861 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 IGLV3-22A0A075B6J6 115 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 CTSHP09668 335 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 INSRRP14616 1297 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 GNA11P29992 359 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 STAT5BP51692 787 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 AKAP17AQ02040 695 aaKnown RBP20.37■□□□□ 0.85
CPNE1-210ENST00000416778 ERICH6BQ5W0A0 696 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 TAF2Q6P1X5 1199 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 SPRED2Q7Z698 418 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 CCDC12Q8WUD4 166 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-210ENST00000416778 SEPT8Q92599 483 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 ZNF274Q96GC6 653 aaPredicted RBP20.37■□□□□ 0.85
CPNE1-210ENST00000416778 GBF1Q92538 1859 aa20.37■□□□□ 0.85
CPNE1-210ENST00000416778 IGKV6D-21A0A0A0MT36 114 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 RRN3P2A6NIE6 340 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 EDIL3O43854 480 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 CCNE2O96020 404 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 ABHD15Q6UXT9 468 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 PLA2G4DQ86XP0 818 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 ARNTL2Q8WYA1 636 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 LARP6Q9BRS8 491 aaKnown RBP20.36■□□□□ 0.85
CPNE1-210ENST00000416778 SLC26A6Q9BXS9 759 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 AZI2Q9H6S1 392 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 MTCH2Q9Y6C9 303 aa20.36■□□□□ 0.85
CPNE1-210ENST00000416778 MGAT3Q09327 533 aa20.35■□□□□ 0.85
CPNE1-210ENST00000416778 PLCB4Q15147 1175 aa20.35■□□□□ 0.85
CPNE1-210ENST00000416778 FAM117BQ6P1L5 589 aa20.35■□□□□ 0.85
CPNE1-210ENST00000416778 REXO1Q8N1G1 1221 aaKnown RBP20.35■□□□□ 0.85
CPNE1-210ENST00000416778 DNAJB3Q8WWF6 145 aa20.35■□□□□ 0.85
CPNE1-210ENST00000416778 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.34■□□□□ 0.85
CPNE1-210ENST00000416778 AMHP03971 560 aa20.34■□□□□ 0.85
CPNE1-210ENST00000416778 CIITAP33076 1130 aa20.34■□□□□ 0.85
CPNE1-210ENST00000416778 TNPO1Q92973 898 aaKnown RBP20.34■□□□□ 0.85
CPNE1-210ENST00000416778 TOP1MTQ969P6 601 aa20.34■□□□□ 0.85
CPNE1-210ENST00000416778 ZBTB10Q96DT7 871 aa20.34■□□□□ 0.85
CPNE1-210ENST00000416778 UPF3BQ9BZI7 483 aaKnown RBP20.34■□□□□ 0.85
CPNE1-210ENST00000416778 SH3GLB2Q9NR46 395 aa20.34■□□□□ 0.85
CPNE1-210ENST00000416778 TUBE1Q9UJT0 475 aa20.34■□□□□ 0.85
CPNE1-210ENST00000416778 INSL6Q9Y581 213 aa20.34■□□□□ 0.85
CPNE1-210ENST00000416778 IPO5O00410 1097 aaKnown RBP20.33■□□□□ 0.85
CPNE1-210ENST00000416778 LPXNO60711 386 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 ERVK-21P61565 698 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 IGBP1P78318 339 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 HTRA4P83105 476 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-210ENST00000416778 RSPH3Q86UC2 560 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 BICD2Q8TD16 824 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 RASGRP4Q8TDF6 673 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 UIMC1Q96RL1 719 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 PDRG1Q9NUG6 133 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 VPS54Q9P1Q0 977 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 PCDHA2Q9Y5H9 948 aa20.33■□□□□ 0.85
CPNE1-210ENST00000416778 POTEB3A0JP26 581 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 LINC01553A4QN01 128 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 SLC26A2P50443 739 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 SSRP1Q08945 709 aaKnown RBP20.32■□□□□ 0.84
CPNE1-210ENST00000416778 GRB10Q13322 594 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 LPIN1Q14693 890 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 KRT40Q6A162 431 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 POTEBQ6S5H4 581 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 MYOCDQ8IZQ8 938 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 ATXN2LQ8WWM7 1075 aaKnown RBP20.32■□□□□ 0.84
CPNE1-210ENST00000416778 APBB2Q92870 758 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 IFIH1Q9BYX4 1025 aaKnown RBP20.32■□□□□ 0.84
CPNE1-210ENST00000416778 TBC1D22BQ9NU19 505 aa20.32■□□□□ 0.84
CPNE1-210ENST00000416778 REV3LO60673 3130 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 DDX39AO00148 427 aaKnown RBP20.31■□□□□ 0.84
CPNE1-210ENST00000416778 ENPP3O14638 875 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 ATP4AP20648 1035 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 USP11P51784 963 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 SWSAP1Q6NVH7 229 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 CCDC148Q8NFR7 591 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 TRAPPC12Q8WVT3 735 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 TGS1Q96RS0 853 aaKnown RBP20.31■□□□□ 0.84
CPNE1-210ENST00000416778 ZNF577Q9BSK1 485 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 SUGCTQ9HAC7 445 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 TRPC6Q9Y210 931 aa20.31■□□□□ 0.84
CPNE1-210ENST00000416778 SPTBN5Q9NRC6 3674 aaKnown RBP20.31■□□□□ 0.84
CPNE1-210ENST00000416778 PTPRSQ13332 1948 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 GTPBP6O43824 516 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-210ENST00000416778 GHRP10912 638 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 NLRP5P59047 1200 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 PRR16Q569H4 304 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 FBXO47Q5MNV8 452 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 MTHFD1LQ6UB35 978 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 TRIM22Q8IYM9 498 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 NME8Q8N427 588 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 SP7Q8TDD2 431 aaPredicted RBP20.3■□□□□ 0.84
CPNE1-210ENST00000416778 LENG9Q96B70 501 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 CDY2AQ9Y6F7 541 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 TTC28Q96AY4 2481 aa20.3■□□□□ 0.84
CPNE1-210ENST00000416778 PRRC2BQ5JSZ5 2229 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms