RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 CTC1Q2NKJ3 1217 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 FBXO47Q5MNV8 452 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 CASC1Q6TDU7 716 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 ADGRD2Q7Z7M1 963 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 SRBD1Q8N5C6 995 aaKnown RBP14.84□□□□□ -0.03
LINC00339-202ENST00000416769 SAMD3Q8N6K7 520 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 TRAPPC12Q8WVT3 735 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 FAM49AQ9H0Q0 323 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-202ENST00000416769 LY9Q9HBG7 655 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 MUTYHQ9UIF7 546 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 ZNF215Q9UL58 517 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-202ENST00000416769 CDY2AQ9Y6F7 541 aa14.84□□□□□ -0.03
LINC00339-202ENST00000416769 MRPL42Q9Y6G3 142 aaKnown RBP14.84□□□□□ -0.03
LINC00339-202ENST00000416769 C5orf67F2Z3F1 127 aa14.83□□□□□ -0.04
LINC00339-202ENST00000416769 IBSPP21815 317 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-202ENST00000416769 CD52P31358 61 aa14.83□□□□□ -0.04
LINC00339-202ENST00000416769 HFE2Q6ZVN8 426 aa14.83□□□□□ -0.04
LINC00339-202ENST00000416769 CATIPQ7Z7H3 387 aa14.83□□□□□ -0.04
LINC00339-202ENST00000416769 RALYLQ86SE5 291 aaKnown RBP14.83□□□□□ -0.04
LINC00339-202ENST00000416769 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
LINC00339-202ENST00000416769 NCOA7Q8NI08 942 aa14.83□□□□□ -0.04
LINC00339-202ENST00000416769 APBB2Q92870 758 aa14.83□□□□□ -0.04
LINC00339-202ENST00000416769 HCSTQ9UBK5 93 aa14.83□□□□□ -0.04
LINC00339-202ENST00000416769 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-202ENST00000416769 ERICH2A1L162 156 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 MBTPS2O43462 519 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 RBM10P98175 930 aaKnown RBP14.82□□□□□ -0.04
LINC00339-202ENST00000416769 PAN2Q504Q3 1202 aaKnown RBP14.82□□□□□ -0.04
LINC00339-202ENST00000416769 ADHFE1Q8IWW8 467 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 ZNF689Q96CS4 500 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-202ENST00000416769 PGBD1Q96JS3 809 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 FBXL18Q96ME1 805 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 PHOX2BQ99453 314 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 SPZ1Q9BXG8 430 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 TUBE1Q9UJT0 475 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 NRCAMQ92823 1304 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 PLXNA4Q9HCM2 1894 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 ZDBF2Q9HCK1 2354 aa14.82□□□□□ -0.04
LINC00339-202ENST00000416769 MBLAC1A4D2B0 266 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-202ENST00000416769 PIK3CDO00329 1044 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 STAM2O75886 525 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 DGKIO75912 1065 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 ITGB1P05556 798 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 GNAT1P11488 350 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 ALADP13716 330 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 BTG3Q14201 252 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-202ENST00000416769 CRIPAKQ8N1N5 446 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 CCDC82Q8N4S0 544 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 CYP2W1Q8TAV3 490 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 CLP1Q92989 425 aaKnown RBP14.81□□□□□ -0.04
LINC00339-202ENST00000416769 RRP36Q96EU6 259 aaKnown RBP14.81□□□□□ -0.04
LINC00339-202ENST00000416769 SENP7Q9BQF6 1050 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 C11orf84Q9BUA3 381 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-202ENST00000416769 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 PLAGL2Q9UPG8 496 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 RBM8AQ9Y5S9 174 aaKnown RBP14.81□□□□□ -0.04
LINC00339-202ENST00000416769 UBIAD1Q9Y5Z9 338 aa14.81□□□□□ -0.04
LINC00339-202ENST00000416769 SGSM2O43147 1006 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 EIF5BO60841 1220 aaKnown RBP14.8□□□□□ -0.04
LINC00339-202ENST00000416769 INSRRP14616 1297 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 MRPS6P82932 125 aaKnown RBP14.8□□□□□ -0.04
LINC00339-202ENST00000416769 NHLH1Q02575 133 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 SMAD2Q15796 467 aaKnown RBP14.8□□□□□ -0.04
LINC00339-202ENST00000416769 CSPP1Q1MSJ5 1256 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 TMEM266Q2M3C6 531 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 PUS10Q3MIT2 529 aaKnown RBP14.8□□□□□ -0.04
LINC00339-202ENST00000416769 TYW1BQ6NUM6 668 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 TAF2Q6P1X5 1199 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 NLRX1Q86UT6 975 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 GLG1Q92896 1179 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 CUL5Q93034 780 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 GPRASP2Q96D09 838 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 ESYT1Q9BSJ8 1104 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 TMX1Q9H3N1 280 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 CLEC1BQ9P126 229 aa14.8□□□□□ -0.04
LINC00339-202ENST00000416769 SH2B2O14492 632 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-202ENST00000416769 PRC1O43663 620 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 GLP2RO95838 553 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 MMP1P03956 469 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 MRE11P49959 708 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 TSHZ1Q6ZSZ6 1077 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 RBM23Q86U06 439 aaKnown RBP14.79□□□□□ -0.04
LINC00339-202ENST00000416769 RNF135Q8IUD6 432 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 KLHL23Q8NBE8 558 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 CTCFLQ8NI51 663 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-202ENST00000416769 SEPT1Q8WYJ6 367 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 PSTPIP2Q9H939 334 aa14.79□□□□□ -0.04
LINC00339-202ENST00000416769 BARX2Q9UMQ3 279 aaPredicted RBP14.79□□□□□ -0.04
LINC00339-202ENST00000416769 MGEA5O60502 916 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 DDAH1O94760 285 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 RB1P06400 928 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 ARP10275 920 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 TRAF1Q13077 416 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 ADAM15Q13444 863 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 SMAD4Q13485 552 aaKnown RBP14.78□□□□□ -0.04
LINC00339-202ENST00000416769 MTMR1Q13613 665 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 SART3Q15020 963 aaKnown RBP14.78□□□□□ -0.04
LINC00339-202ENST00000416769 PLCB4Q15147 1175 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 SPPL3Q8TCT6 385 aa14.78□□□□□ -0.04
LINC00339-202ENST00000416769 MAP4K1Q92918 833 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms