RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 POLE2P56282 527 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 GABPAQ06546 454 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 NLRX1Q86UT6 975 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 NEK9Q8TD19 979 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
SCN1B-202ENST00000415950 ZIM3Q96PE6 472 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 C1orf112Q9NSG2 853 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 CAPN11Q9UMQ6 739 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 G3BP2Q9UN86 482 aaKnown RBP13.95□□□□□ -0.18
SCN1B-202ENST00000415950 SYNJ2BP-COX16A0A087WUM0 186 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 FAM196BA6NMK8 535 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 TDP2O95551 362 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 PLA2G4BP0C869 781 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 ALAS1P13196 640 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 ARL6IP4Q66PJ3 421 aaKnown RBP13.95□□□□□ -0.18
SCN1B-202ENST00000415950 FAM186BQ8IYM0 893 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 COX16Q9P0S2 106 aa13.95□□□□□ -0.18
SCN1B-202ENST00000415950 HMGB1P1B2RPK0 211 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 KIF22Q14807 665 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 DEPTORQ8TB45 409 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 TRIM4Q9C037 500 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 SMYD2Q9NRG4 433 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 ANO9A1A5B4 782 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 ZSCAN5CA6NGD5 496 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 HOXA13P31271 388 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 YARSP54577 528 aaKnown RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 ARHGAP4P98171 946 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 DR1Q01658 176 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 KCNH2Q12809 1159 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 KRT81Q14533 505 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 PFKFB3Q16875 520 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 HDAC7Q8WUI4 952 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 ZMYND12Q9H0C1 365 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 CD248Q9HCU0 757 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 WDR70Q9NW82 654 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 CHORDC1Q9UHD1 332 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 KDM3AQ9Y4C1 1321 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 SPHKAPQ2M3C7 1700 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 PPP1R3GB7ZBB8 358 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 PHBP35232 272 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 COPB2P35606 906 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 NSFP46459 744 aaKnown RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 PDE6CP51160 858 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 MORC4Q8TE76 937 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 TMEM47Q9BQJ4 181 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 AZI2Q9H6S1 392 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 METTL14Q9HCE5 456 aaKnown RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 FAF1Q9UNN5 650 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 MEFVO15553 781 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 IL9RQ01113 521 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 TMED2Q15363 201 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 DBN1Q16643 649 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 CLEC10AQ8IUN9 316 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 AFAP1L2Q8N4X5 818 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 AK8Q96MA6 479 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 HAUS2Q9NVX0 235 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 SEPT10Q9P0V9 454 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 PPP1R9AQ9ULJ8 1098 aa13.94□□□□□ -0.18
SCN1B-202ENST00000415950 MAGED2Q9UNF1 606 aaPredicted RBP13.94□□□□□ -0.18
SCN1B-202ENST00000415950 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 H7C0C1 242 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 PFDN1O60925 122 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 ACTN1P12814 892 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 ATP5OP48047 213 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 MCUQ8NE86 351 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 HVCN1Q96D96 273 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 HEMGNQ9BXL5 484 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 KLC4Q9NSK0 619 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 SPATS2LQ9NUQ6 558 aaKnown RBP13.93□□□□□ -0.18
SCN1B-202ENST00000415950 CAPN6Q9Y6Q1 641 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 GOLGA8IPA6NC78 632 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 GOLGA8JA6NMD2 632 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 EIF3HO15372 352 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCN1B-202ENST00000415950 LIG4P49917 911 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 MUM1L1Q5H9M0 696 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 SUPT20HQ8NEM7 779 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 SCYL1Q96KG9 808 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 YIPF3Q9GZM5 350 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 UBE2TQ9NPD8 197 aaPredicted RBP13.93□□□□□ -0.18
SCN1B-202ENST00000415950 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
SCN1B-202ENST00000415950 POTEB3A0JP26 581 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 POTECB2RU33 542 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 SART1O43290 800 aaKnown RBP13.93□□□□□ -0.18
SCN1B-202ENST00000415950 PDE1BQ01064 536 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 SATB1Q01826 763 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 POTEBQ6S5H4 581 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 ZNF653Q96CK0 615 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 TRIM9Q9C026 710 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 PICK1Q9NRD5 415 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 TMOD4Q9NZQ9 345 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 HNRNPH1P31943 449 aaKnown RBP13.93□□□□□ -0.18
SCN1B-202ENST00000415950 LSP1P33241 339 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 CACNB3P54284 484 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 DYNLT1P63172 113 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 TAF11Q15544 211 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 CCDC125Q86Z20 511 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 METTL13Q8N6R0 699 aa13.93□□□□□ -0.18
SCN1B-202ENST00000415950 MDM1Q8TC05 714 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms