RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 PRUNE2Q8WUY3 3088 aa28.44■■■□□ 2.14
HLA-C-204ENST00000415537 RRN3P2A6NIE6 340 aa28.43■■■□□ 2.14
HLA-C-204ENST00000415537 CYP3A4P08684 503 aa28.43■■■□□ 2.14
HLA-C-204ENST00000415537 STAT5BP51692 787 aa28.43■■■□□ 2.14
HLA-C-204ENST00000415537 IGBP1P78318 339 aa28.43■■■□□ 2.14
HLA-C-204ENST00000415537 FAM117BQ6P1L5 589 aa28.43■■■□□ 2.14
HLA-C-204ENST00000415537 TRIM22Q8IYM9 498 aa28.43■■■□□ 2.14
HLA-C-204ENST00000415537 PCYT2Q99447 389 aa28.43■■■□□ 2.14
HLA-C-204ENST00000415537 TRPC6Q9Y210 931 aa28.43■■■□□ 2.14
HLA-C-204ENST00000415537 FAM86B1E9PN63 330 aa28.42■■■□□ 2.14
HLA-C-204ENST00000415537 DDX39AO00148 427 aaKnown RBP28.42■■■□□ 2.14
HLA-C-204ENST00000415537 GTPBP6O43824 516 aaPredicted RBP28.42■■■□□ 2.14
HLA-C-204ENST00000415537 FAM86B2P0C5J1 330 aa28.42■■■□□ 2.14
HLA-C-204ENST00000415537 FAM26DQ5JW98 314 aa28.42■■■□□ 2.14
HLA-C-204ENST00000415537 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.42■■■□□ 2.145e-7■■■■□ 21.8
HLA-C-204ENST00000415537 RUFY4Q6ZNE9 571 aa28.42■■■□□ 2.14
HLA-C-204ENST00000415537 PLPPR4Q7Z2D5 763 aa28.42■■■□□ 2.14
HLA-C-204ENST00000415537 RPAINQ86UA6 219 aa28.42■■■□□ 2.14
HLA-C-204ENST00000415537 MYOCDQ8IZQ8 938 aa28.42■■■□□ 2.14
HLA-C-204ENST00000415537 UPF3BQ9BZI7 483 aaKnown RBP28.42■■■□□ 2.14
HLA-C-204ENST00000415537 RFXAPO00287 272 aa28.41■■■□□ 2.14
HLA-C-204ENST00000415537 CPLX1O14810 134 aa28.41■■■□□ 2.14
HLA-C-204ENST00000415537 INSRRP14616 1297 aa28.41■■■□□ 2.14
HLA-C-204ENST00000415537 SSRP1Q08945 709 aaKnown RBP28.41■■■□□ 2.14
HLA-C-204ENST00000415537 MICALL1Q8N3F8 863 aa28.41■■■□□ 2.14
HLA-C-204ENST00000415537 APBB2Q92870 758 aa28.41■■■□□ 2.14
HLA-C-204ENST00000415537 ZNF274Q96GC6 653 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-204ENST00000415537 COL25A1Q9BXS0 654 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-204ENST00000415537 VPS54Q9P1Q0 977 aa28.41■■■□□ 2.14
HLA-C-204ENST00000415537 CHD7Q9P2D1 2997 aa28.41■■■□□ 2.14
HLA-C-204ENST00000415537 LCHNA4D1U4 455 aa28.4■■■□□ 2.14
HLA-C-204ENST00000415537 MBLAC1A4D2B0 266 aaPredicted RBP28.4■■■□□ 2.14
HLA-C-204ENST00000415537 ARHGEF15O94989 841 aa28.4■■■□□ 2.14
HLA-C-204ENST00000415537 SETQ01105 290 aaPredicted RBP28.4■■■□□ 2.14
HLA-C-204ENST00000415537 DNAJB3Q8WWF6 145 aa28.4■■■□□ 2.14
HLA-C-204ENST00000415537 CRYGNQ8WXF5 182 aa28.4■■■□□ 2.14
HLA-C-204ENST00000415537 IFIH1Q9BYX4 1025 aaKnown RBP28.4■■■□□ 2.14
HLA-C-204ENST00000415537 SH3GLB2Q9NR46 395 aa28.4■■■□□ 2.14
HLA-C-204ENST00000415537 PDRG1Q9NUG6 133 aa28.4■■■□□ 2.14
HLA-C-204ENST00000415537 INSL6Q9Y581 213 aa28.4■■■□□ 2.14
HLA-C-204ENST00000415537 RBAK-RBAKDNI3L0D1 243 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 IPO5O00410 1097 aaKnown RBP28.39■■■□□ 2.14
HLA-C-204ENST00000415537 BACH1O14867 736 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 ADAMTS3O15072 1205 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 ATG7O95352 703 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 CHRNA1P02708 482 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 RPLP2P05387 115 aaKnown RBP28.39■■■□□ 2.14
HLA-C-204ENST00000415537 SLC26A2P50443 739 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 NLRP5P59047 1200 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 PLCB4Q15147 1175 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 MARCH8Q5T0T0 291 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 FAM160B1Q5W0V3 765 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 CPLX2Q6PUV4 134 aaKnown RBP28.39■■■□□ 2.14
HLA-C-204ENST00000415537 LARP6Q9BRS8 491 aaKnown RBP28.39■■■□□ 2.14
HLA-C-204ENST00000415537 ZNF577Q9BSK1 485 aa28.39■■■□□ 2.14
HLA-C-204ENST00000415537 TSPYL2Q9H2G4 693 aaPredicted RBP28.39■■■□□ 2.14
HLA-C-204ENST00000415537 IGLV3-22A0A075B6J6 115 aa28.38■■■□□ 2.13
HLA-C-204ENST00000415537 POTEB3A0JP26 581 aa28.38■■■□□ 2.13
HLA-C-204ENST00000415537 STK3Q13188 491 aa28.38■■■□□ 2.13
HLA-C-204ENST00000415537 POTEBQ6S5H4 581 aa28.38■■■□□ 2.13
HLA-C-204ENST00000415537 RASGRP4Q8TDF6 673 aa28.38■■■□□ 2.13
HLA-C-204ENST00000415537 OSBPL7Q9BZF2 842 aa28.38■■■□□ 2.13
HLA-C-204ENST00000415537 TBC1D22BQ9NU19 505 aa28.38■■■□□ 2.13
HLA-C-204ENST00000415537 TCEAL9Q9UHQ7 104 aa28.38■■■□□ 2.13
HLA-C-204ENST00000415537 EPOPA6NHQ4 379 aa28.37■■■□□ 2.13
HLA-C-204ENST00000415537 MKRN4PQ13434 485 aaPredicted RBP28.37■■■□□ 2.13
HLA-C-204ENST00000415537 MIS18BP1Q6P0N0 1132 aa28.37■■■□□ 2.13
HLA-C-204ENST00000415537 UIMC1Q96RL1 719 aa28.37■■■□□ 2.13
HLA-C-204ENST00000415537 PRDM6Q9NQX0 595 aa28.37■■■□□ 2.13
HLA-C-204ENST00000415537 SIP14410 1827 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 CCNE2O96020 404 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 GHRP10912 638 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 POU3F3P20264 500 aaPredicted RBP28.36■■■□□ 2.13
HLA-C-204ENST00000415537 PRR16Q569H4 304 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 IER5Q5VY09 327 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 ABHD15Q6UXT9 468 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 SYMPKQ92797 1274 aaKnown RBP28.36■■■□□ 2.13
HLA-C-204ENST00000415537 TGS1Q96RS0 853 aaKnown RBP28.36■■■□□ 2.13
HLA-C-204ENST00000415537 FAM49AQ9H0Q0 323 aaPredicted RBP28.36■■■□□ 2.13
HLA-C-204ENST00000415537 ZNF302Q9NR11 478 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 THEGQ9P2T0 379 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 MTCH2Q9Y6C9 303 aa28.36■■■□□ 2.13
HLA-C-204ENST00000415537 MYH9P35579 1960 aaKnown RBP28.36■■■□□ 2.13
HLA-C-204ENST00000415537 IGKV6D-21A0A0A0MT36 114 aa28.35■■■□□ 2.13
HLA-C-204ENST00000415537 M0QZ92 97 aa28.35■■■□□ 2.13
HLA-C-204ENST00000415537 DHX15O43143 795 aaKnown RBP28.35■■■□□ 2.13
HLA-C-204ENST00000415537 UPP2O95045 317 aa28.35■■■□□ 2.13
HLA-C-204ENST00000415537 DEXIO95424 95 aa28.35■■■□□ 2.13
HLA-C-204ENST00000415537 MGAT3Q09327 533 aa28.35■■■□□ 2.13
HLA-C-204ENST00000415537 TOP1MTQ969P6 601 aa28.35■■■□□ 2.13
HLA-C-204ENST00000415537 CDY2AQ9Y6F7 541 aa28.35■■■□□ 2.13
HLA-C-204ENST00000415537 LINC01553A4QN01 128 aa28.34■■■□□ 2.13
HLA-C-204ENST00000415537 CIITAP33076 1130 aa28.34■■■□□ 2.13
HLA-C-204ENST00000415537 MRPS6P82932 125 aaKnown RBP28.34■■■□□ 2.13
HLA-C-204ENST00000415537 PDXDC2PQ6P474 469 aa28.34■■■□□ 2.13
HLA-C-204ENST00000415537 SPRED2Q7Z698 418 aa28.34■■■□□ 2.13
HLA-C-204ENST00000415537 TRAPPC12Q8WVT3 735 aa28.34■■■□□ 2.13
HLA-C-204ENST00000415537 ZBTB10Q96DT7 871 aa28.34■■■□□ 2.13
HLA-C-204ENST00000415537 MTUS1Q9ULD2 1270 aa28.34■■■□□ 2.13
HLA-C-204ENST00000415537 PCDHA2Q9Y5H9 948 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms