RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, human

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN5A-204	ENST00000414099	GRAP	Q13588	217 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	FSCB	Q5H9T9	825 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	GRAPL	Q8TC17	118 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	MRFAP1L1	Q96HT8	127 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	PGBD1	Q96JS3	809 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	SMYD2	Q9NRG4	433 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	EEF1B2	P24534	225 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	RPAIN	Q86UA6	219 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	DNAAF3	Q8N9W5	541 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	OPTN	Q96CV9	577 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	DNAJC17	Q9NVM6	304 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	hCG_1642624	A0A1W2PR95	340 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	MAP3K10	Q02779	954 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	DNAJC24	Q6P3W2	148 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	SCYL3	Q8IZE3	742 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	OVOS2	A0A0G2JMS6	1433 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	OVOS2	A0A0J9YW53	1432 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	OVOS2	Q6IE36	1432 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	GOLGA8M	H3BSY2	632 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	PRPSAP2	O60256	369 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	TSPY1	Q01534	308 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	LONRF3	Q496Y0	759 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	FAM149B1	Q96BN6	582 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	FEM1B	Q9UK73	627 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	CDV3	Q9UKY7	258 aa	Known RBP	11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	CCDC151	A5D8V7	595 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	OR9Q1	Q8NGQ5	310 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099	TRAIP	Q9BWF2	469 aa		11.44	□□□□□ -0.58
SCN5A-204	ENST00000414099		K7ERI5	159 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	PAPOLA	P51003	745 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	SGO2	Q562F6	1265 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	DSTYK	Q6XUX3	929 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	NOP9	Q86U38	636 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	SKAP1	Q86WV1	359 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	DDX17	Q92841	729 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	DDX50	Q9BQ39	737 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	PPP1R12A	O14974	1030 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	MAPK13	O15264	365 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	TAF1B	Q53T94	588 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	KCNV1	Q6PIU1	500 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	KCTD1	Q719H9	257 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	STX19	Q8N4C7	294 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	ZNF341	Q9BYN7	854 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	BSDC1	Q9NW68	430 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	ITM2B	Q9Y287	266 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	MT-ND3	P03897	115 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	PHKA2	P46019	1235 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	RCN2	Q14257	317 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	LZIC	Q8WZA0	190 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	SYMPK	Q92797	1274 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	MAP3K4	Q9Y6R4	1608 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	HDAC4	P56524	1084 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	MCPH1	Q8NEM0	835 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	MAGOHB	Q96A72	148 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	DPH5	Q9H2P9	285 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	POC1B-GALNT4	F8VUJ3	575 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	PGRMC1	O00264	195 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	ADK	P55263	362 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	ADCY2	Q08462	1091 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	TBCC	Q15814	346 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	SLITRK6	Q9H5Y7	841 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	CHCHD3	Q9NX63	227 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	NDE1	Q9NXR1	346 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	ARHGAP31	Q2M1Z3	1444 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	SOX5	P35711	763 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	NR1H3	Q13133	447 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	AP3B2	Q13367	1082 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	ME3	Q16798	604 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	CNOT6L	Q96LI5	555 aa	Known RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	MAGEB5	Q9BZ81	275 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	COX16	Q9P0S2	106 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	SUN2	Q9UH99	717 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	HEG1	Q9ULI3	1381 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	BUB1	O43683	1085 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	CDC42EP1	Q00587	391 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	CUL1	Q13616	776 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099		Q3C1V9	767 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	C6orf118	Q5T5N4	469 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	SPICE1	Q8N0Z3	855 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	CARMIL3	Q8ND23	1372 aa		11.43	□□□□□ -0.58
SCN5A-204	ENST00000414099	FAM95C	A0A1B0GW59	222 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	DENND3	A2RUS2	1198 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	ORC2	Q13416	577 aa	Predicted RBP	11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	LRRC23	Q53EV4	343 aa	Predicted RBP	11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	ZMYM1	Q5SVZ6	1142 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	LRRC8A	Q8IWT6	810 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	SLC39A2	Q9NP94	309 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	JAK2	O60674	1132 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	FRA10AC1	Q70Z53	315 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	GJA10	Q969M2	543 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	UIMC1	Q96RL1	719 aa		11.42	□□□□□ -0.58
SCN5A-204	ENST00000414099	MTR	Q99707	1265 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms