RNA–Protein interactions for RNA: ENST00000414040.6

TNFRSF25-206, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,198 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-206ENST00000414040 PRRC2BQ5JSZ5 2229 aaKnown RBP25.93■■□□□ 1.74
TNFRSF25-206ENST00000414040 MYH9P35579 1960 aaKnown RBP25.93■■□□□ 1.74
TNFRSF25-206ENST00000414040 IGLV3-22A0A075B6J6 115 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 CCNE2O96020 404 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 IGBP1P78318 339 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 KRT40Q6A162 431 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 ARNTL2Q8WYA1 636 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 SDF4Q9BRK5 362 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 GLT8D2Q9H1C3 349 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 SMARCAD1Q9H4L7 1026 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 VPS54Q9P1Q0 977 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 VCANP13611 3396 aa25.92■■□□□ 1.74
TNFRSF25-206ENST00000414040 NLRC5Q86WI3 1866 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 EPB41L2O43491 1005 aaKnown RBP25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 CAND2O75155 1236 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 GJB5O95377 273 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 CHRNA1P02708 482 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 IFNAR1P17181 557 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 ZNF76P36508 570 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 TRAPPC12Q8WVT3 735 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 ZBED2Q9BTP6 218 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 RNF26Q9BY78 433 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 TUBE1Q9UJT0 475 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 CYP46A1Q9Y6A2 500 aa25.91■■□□□ 1.74
TNFRSF25-206ENST00000414040 EVPLQ92817 2033 aa25.9■■□□□ 1.74
TNFRSF25-206ENST00000414040 KIF28PB7ZC32 967 aa25.9■■□□□ 1.74
TNFRSF25-206ENST00000414040 FAM26DQ5JW98 314 aa25.9■■□□□ 1.74
TNFRSF25-206ENST00000414040 PLA2G4DQ86XP0 818 aa25.9■■□□□ 1.74
TNFRSF25-206ENST00000414040 REXO1Q8N1G1 1221 aaKnown RBP25.9■■□□□ 1.74
TNFRSF25-206ENST00000414040 MICALL1Q8N3F8 863 aa25.9■■□□□ 1.74
TNFRSF25-206ENST00000414040 C6orf50Q9HD87 102 aa25.9■■□□□ 1.74
TNFRSF25-206ENST00000414040 MBLAC1A4D2B0 266 aaPredicted RBP25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 EDIL3O43854 480 aa25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 CYP3A4P08684 503 aa25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 INSRRP14616 1297 aa25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 MGAT3Q09327 533 aa25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 PLCB4Q15147 1175 aa25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 NIPA1Q7RTP0 329 aa25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 MYOCDQ8IZQ8 938 aa25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 DNAJB3Q8WWF6 145 aa25.89■■□□□ 1.74
TNFRSF25-206ENST00000414040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.88■■□□□ 1.73
TNFRSF25-206ENST00000414040 DHX15O43143 795 aaKnown RBP25.88■■□□□ 1.73
TNFRSF25-206ENST00000414040 DTNBO60941 627 aa25.88■■□□□ 1.73
TNFRSF25-206ENST00000414040 AKAP17AQ02040 695 aaKnown RBP25.88■■□□□ 1.73
TNFRSF25-206ENST00000414040 STK3Q13188 491 aa25.88■■□□□ 1.73
TNFRSF25-206ENST00000414040 SEPT8Q92599 483 aa25.88■■□□□ 1.73
TNFRSF25-206ENST00000414040 TM6SF1Q9BZW5 370 aa25.88■■□□□ 1.73
TNFRSF25-206ENST00000414040 EFCAB14O75071 495 aa25.87■■□□□ 1.73
TNFRSF25-206ENST00000414040 ATG7O95352 703 aa25.87■■□□□ 1.73
TNFRSF25-206ENST00000414040 GHRP10912 638 aa25.87■■□□□ 1.73
TNFRSF25-206ENST00000414040 CCDC12Q8WUD4 166 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF25-206ENST00000414040 AZI2Q9H6S1 392 aa25.87■■□□□ 1.73
TNFRSF25-206ENST00000414040 MTUS1Q9ULD2 1270 aa25.87■■□□□ 1.73
TNFRSF25-206ENST00000414040 TRPC6Q9Y210 931 aa25.87■■□□□ 1.73
TNFRSF25-206ENST00000414040 MTCH2Q9Y6C9 303 aa25.87■■□□□ 1.73
TNFRSF25-206ENST00000414040 LINC01553A4QN01 128 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 LPXNO60711 386 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 STAT5BP51692 787 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 GRB10Q13322 594 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 TAF2Q6P1X5 1199 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 RPAINQ86UA6 219 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 CCDC60Q8IWA6 550 aaPredicted RBP25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 GDPD5Q8WTR4 605 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 AIFM3Q96NN9 605 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 RAD9AQ99638 391 aa25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 IFIH1Q9BYX4 1025 aaKnown RBP25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 FAM49AQ9H0Q0 323 aaPredicted RBP25.86■■□□□ 1.73
TNFRSF25-206ENST00000414040 SPTBN5Q9NRC6 3674 aaKnown RBP25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 IGKV6D-21A0A0A0MT36 114 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 IPO5O00410 1097 aaKnown RBP25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 AMHP03971 560 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 GNA11P29992 359 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 LPIN1Q14693 890 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 ABHD15Q6UXT9 468 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 PLPPR4Q7Z2D5 763 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 LENG9Q96B70 501 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 PDRG1Q9NUG6 133 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 CDY2AQ9Y6F7 541 aa25.85■■□□□ 1.73
TNFRSF25-206ENST00000414040 ATG2AQ2TAZ0 1938 aa25.84■■□□□ 1.73
TNFRSF25-206ENST00000414040 TMEM62Q0P6H9 643 aa25.84■■□□□ 1.73
TNFRSF25-206ENST00000414040 PRR16Q569H4 304 aa25.84■■□□□ 1.73
TNFRSF25-206ENST00000414040 CCDC148Q8NFR7 591 aa25.84■■□□□ 1.73
TNFRSF25-206ENST00000414040 ZNF274Q96GC6 653 aaPredicted RBP25.84■■□□□ 1.73
TNFRSF25-206ENST00000414040 ZNF577Q9BSK1 485 aa25.84■■□□□ 1.73
TNFRSF25-206ENST00000414040 COL4A6Q14031 1691 aa25.83■■□□□ 1.73
TNFRSF25-206ENST00000414040 RALGAPA2Q2PPJ7 1873 aa25.83■■□□□ 1.73
TNFRSF25-206ENST00000414040 UPP2O95045 317 aa25.83■■□□□ 1.73
TNFRSF25-206ENST00000414040 HTRA4P83105 476 aaPredicted RBP25.83■■□□□ 1.73
TNFRSF25-206ENST00000414040 TCF20Q9UGU0 1960 aaKnown RBP25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 KIAA1671Q9BY89 1806 aa25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 POTEB3A0JP26 581 aa25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 RRN3P2A6NIE6 340 aa25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 BACH1O14867 736 aa25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 POU3F3P20264 500 aaPredicted RBP25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 ATP4AP20648 1035 aa25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 NLRP5P59047 1200 aa25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 MRPS6P82932 125 aaKnown RBP25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 SSRP1Q08945 709 aaKnown RBP25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 FBXO47Q5MNV8 452 aa25.82■■□□□ 1.72
TNFRSF25-206ENST00000414040 POTEBQ6S5H4 581 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms