RNA–Protein interactions for RNA: ENST00000413718.1

LINC00111-201, long intergenic non-protein coding RNA 111, humanhuman

TSL 3 BASIC

Gene LINC00111, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00111-201ENST00000413718 MARCH8Q5T0T0 291 aa10.88□□□□□ -0.67
LINC00111-201ENST00000413718 CWC27Q6UX04 472 aaKnown RBP10.88□□□□□ -0.67
LINC00111-201ENST00000413718 TSHZ1Q6ZSZ6 1077 aa10.88□□□□□ -0.67
LINC00111-201ENST00000413718 TRIM67Q6ZTA4 783 aa10.88□□□□□ -0.67
LINC00111-201ENST00000413718 HOMER1Q86YM7 354 aa10.88□□□□□ -0.67
LINC00111-201ENST00000413718 CMTR2Q8IYT2 770 aaKnown RBP10.88□□□□□ -0.67
LINC00111-201ENST00000413718 EFHBQ8N7U6 833 aa10.88□□□□□ -0.67
LINC00111-201ENST00000413718 CNNM2Q9H8M5 875 aa10.88□□□□□ -0.67
LINC00111-201ENST00000413718 AGO3Q9H9G7 860 aaKnown RBP10.88□□□□□ -0.67
LINC00111-201ENST00000413718 SPTBN4Q9H254 2564 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 PNMA6FA0A0J9YX94 578 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 CSPG5O95196 566 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 KCNA2P16389 499 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 PTPN5P54829 565 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 ZXDAP98168 799 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 BTG3Q14201 252 aaPredicted RBP10.87□□□□□ -0.67
LINC00111-201ENST00000413718 UTP14CQ5TAP6 766 aaKnown RBP10.87□□□□□ -0.67
LINC00111-201ENST00000413718 PCNX4Q63HM2 1172 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 RTN4RL1Q86UN2 441 aaPredicted RBP10.87□□□□□ -0.67
LINC00111-201ENST00000413718 VN1R2Q8NFZ6 395 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 SUSD6Q92537 303 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 ASIC4Q96FT7 647 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 DIAPH3Q9NSV4 1193 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 TUBE1Q9UJT0 475 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 PCDHGC5Q9Y5F6 944 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 CDY2AQ9Y6F7 541 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 DCHS1Q96JQ0 3298 aa10.87□□□□□ -0.67
LINC00111-201ENST00000413718 GVINP1Q7Z2Y8 2422 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 GSTTP1A0A1W2PQM5 241 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 HIP1O00291 1037 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 MEIS2O14770 477 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 ATP9AO75110 1047 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 CD52P31358 61 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 TCF7P36402 384 aaPredicted RBP10.86□□□□□ -0.67
LINC00111-201ENST00000413718 NDUFV1P49821 464 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 PPFIA1Q13136 1202 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 GRIK4Q16099 956 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 NAALADL2Q58DX5 795 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 XRRA1Q6P2D8 792 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 NPAS4Q8IUM7 802 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 ZBTB10Q96DT7 871 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 PCYT2Q99447 389 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 RTEL1Q9NZ71 1219 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 BARX2Q9UMQ3 279 aaPredicted RBP10.86□□□□□ -0.67
LINC00111-201ENST00000413718 USP15Q9Y4E8 981 aaPredicted RBP10.86□□□□□ -0.67
LINC00111-201ENST00000413718 TAF6LQ9Y6J9 622 aa10.86□□□□□ -0.67
LINC00111-201ENST00000413718 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 CACNA1AO00555 2505 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 ITGB5P18084 799 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 GATMP50440 423 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 VCPP55072 806 aaKnown RBP10.85□□□□□ -0.67
LINC00111-201ENST00000413718 ANTXR2P58335 489 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 MRPS6P82932 125 aaKnown RBP10.85□□□□□ -0.67
LINC00111-201ENST00000413718 SP4Q02446 784 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 TRAF1Q13077 416 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 USP17L6PQ6QN14 398 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 KLHL23Q8NBE8 558 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 ATP8B4Q8TF62 1192 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 POF1BQ8WVV4 589 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 DNAJB3Q8WWF6 145 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 GPRASP2Q96D09 838 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 IGFLR1Q9H665 355 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 RIF1Q5UIP0 2472 aaKnown RBP10.85□□□□□ -0.67
LINC00111-201ENST00000413718 PLXNA3P51805 1871 aa10.85□□□□□ -0.67
LINC00111-201ENST00000413718 IGSF9BQ9UPX0 1349 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 ST18O60284 1047 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 CYP21A2P08686 494 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 MARK3P27448 753 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 NRIP1P48552 1158 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 RBM10P98175 930 aaKnown RBP10.84□□□□□ -0.67
LINC00111-201ENST00000413718 SIGLEC14Q08ET2 396 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 KCNC3Q14003 757 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 PKN1Q16512 942 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 FBXL6Q8N531 539 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 PHF7Q9BWX1 381 aaPredicted RBP10.84□□□□□ -0.67
LINC00111-201ENST00000413718 SPZ1Q9BXG8 430 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 TMX1Q9H3N1 280 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 ERAP1Q9NZ08 941 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 UBIAD1Q9Y5Z9 338 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 SQORQ9Y6N5 450 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 KDM3AQ9Y4C1 1321 aa10.84□□□□□ -0.67
LINC00111-201ENST00000413718 FSCN2O14926 492 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 SCG2P13521 617 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 ATF7P17544 494 aaPredicted RBP10.83□□□□□ -0.68
LINC00111-201ENST00000413718 IRX6P78412 446 aaPredicted RBP10.83□□□□□ -0.68
LINC00111-201ENST00000413718 RSPH3Q86UC2 560 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 SEPT1Q8WYJ6 367 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 PPP2R3CQ969Q6 453 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 PBXIP1Q96AQ6 731 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 PRRX2Q99811 253 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 FTHL17Q9BXU8 183 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 HCSTQ9UBK5 93 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 TRPV2Q9Y5S1 764 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 FAM186AA6NE01 2351 aa10.83□□□□□ -0.68
LINC00111-201ENST00000413718 MGEA5O60502 916 aa10.82□□□□□ -0.68
LINC00111-201ENST00000413718 RPLP2P05387 115 aaKnown RBP10.82□□□□□ -0.68
LINC00111-201ENST00000413718 GSPT1P15170 499 aaKnown RBP10.82□□□□□ -0.68
LINC00111-201ENST00000413718 DUSP6Q16828 381 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms